Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2357 |
Symbol | |
ID | 1045382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2690658 |
End bp | 2691251 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637145781 |
Product | spore coat U domain protein |
Protein accession | NP_744506 |
Protein GI | 26989081 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.507972 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACATC GGCTGCGCCG CCTCACTGCT ACGCTCAGTT CAGGACGTTT CGATAAGGAT AACAAGGTGA CGGAGCGCAT GCTGGCCGCG CTGTTCGGCC TGTTGTTCAG CGGCAGTACC GTGGCGGCGG ATTTTCTCGT GGAAGTGCGG GTACTGGTGC AGCGTGGCTG CATGCTGGTC AACCAGACCC GCGATGCGGG AGCTCAGGCC CTGGGACGTA TCGACCTAGG GGCGACGGCG CGCCTGGATG GCCCTGGCGC GCCCTTGAGT GGTGTGCTGT TGAGCCAGCG TCCGCCGCGC CTGGAGTGCA ACCCGGATAC GCCCTATCAG GTGCGCGTCG ATGGTGGCCA GCATGGTGGC ATCGGCGAAC TGCGCTACCT GGCCAGCGAC GATCACCTGG CGCGGCCCAT TCCTTACCGC TTGTACCGTG ACGCTGCCTG GCGTGAGCCG CTGGCAGTGG GGGTAGCCCA ATCGGCGCGT GTACCGGGCA GCGGTTCGGT TGAATTGCCG TTGTATGCGC GTATCGACAA ATTGGCCTGG GTGCCGGATG CAGGGGTTTA TGCCGACCTG CTGAAAGTCA CCGTCACCTG GTAG
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Protein sequence | MPHRLRRLTA TLSSGRFDKD NKVTERMLAA LFGLLFSGST VAADFLVEVR VLVQRGCMLV NQTRDAGAQA LGRIDLGATA RLDGPGAPLS GVLLSQRPPR LECNPDTPYQ VRVDGGQHGG IGELRYLASD DHLARPIPYR LYRDAAWREP LAVGVAQSAR VPGSGSVELP LYARIDKLAW VPDAGVYADL LKVTVTW
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