| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2356 |
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| Symbol | |
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| ID | 1045381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2688209 |
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| End bp | 2690476 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637145780 |
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| Product | phytochrome family protein, putative |
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| Protein accession | NP_744505 |
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| Protein GI | 26989080 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.634458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGAG CTTTTTCAAT CATGACTGCA GACAACTCAC TGGCAGACGC CATGGAGCGC
TGTGCCCAGG AACCGATCCA GGTTCCGGGC AGCATCCAGC CTCACGGCTT TCTGCTGGTG
CTGGATGCCA CCGACCTGCG TGTGCTGCAG GCCAGTGAAA ATGTCGAGCA CTGGTTGGGC
TTGCCAGCCC GCGAACTGAT CGGTTGCCAC TTCGCCGACC TGGTTCACGA GGGCTTTGAC
CTGCACGCGC ACCTGACACG GCTTCCCGAA GATGAAGTCT TCCCCTTCCA CATTGGCGAC
GTGCGCTTGC GCCAGGGCGC CCCCATCAGT GCCCTGCTGC ACATGCTGGT CCATTGCCAC
GATCAGGTAC TGATTGCCGA GTTCGAACCG CCCCGCCTGC CAGCAGACCT GGTCGGGCAA
GGCGACTATT ACCCGTTGGT GCGCAGCTTT GTCGCCAGTC TGCAAGTGGC CAGCAGTATC
GAAGACCTGC TGCAGCAAAC GGTGTTGCAG CTCAAGCGGA TCACCGGCTT TGGGCGGGTC
AAAGCCTACC GTTTCGATGC CGAAGGCAAT GGCCAGGTGC TGGCCGAGGT AGTCGACCCC
GGCTACCCCA GCTACGCAGG CCTGTGTTTC CCGGCTGCAG ACATCCCGCG CCAGGCGCGC
GAGCTGTACC GGGTCAACCG TATCCGCGTG ATCGAAGATG CCAACTATCA GCCCTCGCCA
CTGCTGCCCG CTACCAACCC GCGCACCGGC AAGCCGCTGG ACATGAGTTT TGCTGCGCTG
CGTAGCGTAT CGCCCGTGCA CCTGCAGTAC ATGCGCAACA TGGGCACGCT GGCTTCGATG
TCGCTGTCGA TCGTGGTTGA CGGCCAGCTG TGGGGGCTGA TTTCCTGCCA CCATCAACAG
CCACGCCCGG TGGACCTGCG CACCCGCACG GCCTGCGAGC TGTTGGCCAG CGTGCTGTCG
CTGCAGATAG AGTCCCGCGA GTCCCATGCC AGTACGCGCA AGCTGTTGAC GCTGCGCCAG
CACATCGTAC GCATGATCTC GTCCATGGCC GACCACGACA GCGTAAGTGA CGGCCTGCGC
GACCTGCCTG AAGTGCTGCT GGCCTTCGCC GACGCGCAGG GCGCGGCAGT GATCTCGGCC
GAGCGCTGTG ACCTGATCGG CCAGACCCCG CCTGAAGCCC AGGTGACGGC GCTGGTGCAC
TGGCTAGGCC AACGTGACGA AGACAAGGTA TTCCATAGCG ACAACCTGCG CCGCGACATC
ACTGAGCTGC CCGAGCTGGC AAACCATGCT GGCGGGGTGC TGGCGGTGGC CATCTCGCAG
ATCCACTCGC ACTACCTGCT GTGGTTCCGC CCCGAGCAGA TACGCACGGT CAACTGGGCC
GGCCAGCCGA CCAAGCAGGT CGGGCCACAG GGCAACCTCG ACCCGCGGCA CAGTTTTGAA
CGCTGGCAGG AAGAACAGCG CGGCTATAGC CAGGCGTGGG ACCCGCTGGT GATCGAGGGC
GTGATAGAGT TGCGCGCCGC GGTACTGGGC ATTGTCCTGC GCAAGGCCGA AGAACTGGCA
CAACTGGCTG GCGAATTGCG CCGTTCCAAC AAGGAGCTCG AAGCGTTTTC CTACAGTGTT
TCCCACGACC TGCGCGCCCC GCTGCGGCAC ATCGCCGGCT ATACCGAACT GCTTGGCGAG
ATCGAAGGCC AAGGCTTGAG CGAACGCGGC AAGCGCTTCC TCCAGCATAT CGGTGAGGCG
GCGCACTTTG CCGGCAGCCT GGTCGACAAC CTGCTCAACT TCTCGCAGAT GGGCCGCTCG
GCCTTGCGCC TGTCCGATGT CGACCTCAAC GCCCTGGTCG AGGCCATTCG CAGCGAGCTG
GCCCCCGATT ACGAAGGTCG CGCAATCGTT TGGGACATCG CCCCGCTGCC CAAGGTGATC
GGCGACCCGG CATTCATCAA CATGGCCTTG CACAACCTGA TAGCCAATGC CATCAAGTAC
ACTCGCGGCC GTACGCCTGC TCGCATCGAG ATCAGTGCCG TACAGCACCC TGAAGAAACC
GAGGTCTGCA TCCGCGACAA TGGCGTGGGC TTCGACATGG CCTACGCCAA CAAGCTGTTC
GGCGTCTTCC AGCGCCTGCA CCGCATGGAA GATTTCGAAG GCACCGGCAT TGGCCTGGCG
AGTGTACGCC GCATCATCGA GCGCCACGAC GGTCGAGTCT GGGCCACTGG CCAGGTCGAC
CAAGGCGCCA GCTTCCACTT CACCCTACCC CGAAACACTG CTACCTGA
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| Protein sequence | MTGAFSIMTA DNSLADAMER CAQEPIQVPG SIQPHGFLLV LDATDLRVLQ ASENVEHWLG
LPARELIGCH FADLVHEGFD LHAHLTRLPE DEVFPFHIGD VRLRQGAPIS ALLHMLVHCH
DQVLIAEFEP PRLPADLVGQ GDYYPLVRSF VASLQVASSI EDLLQQTVLQ LKRITGFGRV
KAYRFDAEGN GQVLAEVVDP GYPSYAGLCF PAADIPRQAR ELYRVNRIRV IEDANYQPSP
LLPATNPRTG KPLDMSFAAL RSVSPVHLQY MRNMGTLASM SLSIVVDGQL WGLISCHHQQ
PRPVDLRTRT ACELLASVLS LQIESRESHA STRKLLTLRQ HIVRMISSMA DHDSVSDGLR
DLPEVLLAFA DAQGAAVISA ERCDLIGQTP PEAQVTALVH WLGQRDEDKV FHSDNLRRDI
TELPELANHA GGVLAVAISQ IHSHYLLWFR PEQIRTVNWA GQPTKQVGPQ GNLDPRHSFE
RWQEEQRGYS QAWDPLVIEG VIELRAAVLG IVLRKAEELA QLAGELRRSN KELEAFSYSV
SHDLRAPLRH IAGYTELLGE IEGQGLSERG KRFLQHIGEA AHFAGSLVDN LLNFSQMGRS
ALRLSDVDLN ALVEAIRSEL APDYEGRAIV WDIAPLPKVI GDPAFINMAL HNLIANAIKY
TRGRTPARIE ISAVQHPEET EVCIRDNGVG FDMAYANKLF GVFQRLHRME DFEGTGIGLA
SVRRIIERHD GRVWATGQVD QGASFHFTLP RNTAT
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