Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2351 |
Symbol | |
ID | 1045356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2681432 |
End bp | 2683321 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637145774 |
Product | acetyl-CoA synthetase, putative |
Protein accession | NP_744500 |
Protein GI | 26989075 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00120484 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCTACC AGCACAGCTA CGCCCATTCC ATTTCCGACC CTGCCGCTTT CTGGGCGGAA CAGGCCGCAC ACCTGGCCTG GCACCGCAAG CCTGCCCTGA CCCTGCAAGA TAACGCCGAC GGTACCCACC GCTGGTTCGC GGATGGCCGC CTGAACAGCT GTTACCTGGC CCTCGACCAC CAGATCGAGC AGGGCCGCGG CGAGCAGTTG GCGCTGATCT ACGATTCGCC AGTGACCGGC GTGCAGCAGA CCTACACCTA CAACCAATTG CGCGACGAGG TGGCACGCCT GGCCGGTTTG CTGCGCCAGC TGGGGGTGAA CAAGGGCGAT GGCGTGATCA TCTACATGCC CATGGTGCCG CAAGCGGCCA TGGCGATGCT GGCCTGCGCG CGGATCGGCG CGGTGCATTC GGTCGTGTTC GGTGGCTTTG CCGCCAACGA GTTGGCCCTG CGCATCGATG ACGCCCGGCC CACCTTGTTG CTGACGGCAT CGTGCGGGCT GGAGTTCGAC CGGGTCATTG CATACAAACC GCTGGTTGAC CGTGCCCTGC AACTGGCCCG GCACCAGCCG CGCAATGTGC TGGTGCTGCA GCGGCCACAG GCACACGCTG AACTGCTGCC TGGCCGCGAC CTGGACTGGC AGGCGGCCTT GGCCGACGCC GAGCCGGTGG CCCCCGTCGA GCTGGATGCC GGCGACCCGC TGTACATCAT GTATACCTCA GGCACCACCG GTAAGCCCAA GGGTATCGTC CGGGAAAACG GCGGCAATGC CGTGGCGCTG TGTTACGCCA TGCGCCATAT CTATGGCATG CAGGCCGGTG ATGTGTGGTG GGGCATTTCC GACGTCGGTT GGGTGGTCGG CCACTCACTG ATCGTCTACG GGCCGTTGAT GAGCGGCTGT ACCACGGTGT TCTACGAAGG CAAGCCAATC CGCACCCCGG ATGCTTCGGC CTATTGGCGG GTGGTGGAGC AGTACCGGGT CAACGCGCTG TTCTGTGCAC CTACGGCCAT GCGCGCCATC CGCAAGGAGG ACCCGGAGGG CGACCTGATT CGCAAACATG ACCTCAGCTC GCTGCGGCAA CTGTTCCTGG CGGGGGAAAA GCTGGATTCC AGCACCCATG AATGGCTGGA ACGGGTGAGT GGCAAGCCGG TGCACGACCA CTGGTGGCAG ACCGAGACCG GCTGGCCGGT CACCGCGCCT TGCGTCGGGC TGGAGGGCAG TGCGGCGAAG CCAGGATCGA GCAACCGGGC GGTGCCGGGT TACAACGTTC GCGTACTGGA TGACGAAGGC CACTTGCTCG GGGCCAACCA TCAGGGTTCG ATCGTGATTG CCCTGCCATT GCCACCCGGT TGCAGTCAGA CGCTGTGGGG GGATCACGAG CGCTACCTGC AGGCCTACCT GCGCACGTAT CCGGGGTACT ACCACACGGG CGATGGCGGC TATCTGGACG ATGATGGTTT CGTCTACATC ATGGGGCGCA CCGATGATGT GATCAACGTT TCCGGTCATC GTTTGTCCAC CGGTGAAATG GAAGACCTGG TCGCCCGCCA CCCGGCGGTA GCGGAGTGTG CTGTGATCGG TGTGCATGAC GAGATCAAGG GCCAGGTACC GTTGGCGCTG GTGGTACTCA AGGATGGCGA GGGCATTGCC GAGGCGCAGT TGCTGGTGGA GCTGGTGGGC AGCGTGCGCG AGGAAATTGG CCCGCTGGCC TGTTTCAACC GGGTACGGCT GGTGAAGCGC CTGCCCAAGA CCCGTTCCGG CAAGATTCTG CGGGCGGTGC TGCGCAAGAT TGCCGATGGG CAGGATTATG TGCCGCCGTC GACCCTGGAT GACCCGGCAG TGCTGGGGGA GATCGAAGCG GTGCTGGCAG ATTTGCCCAG GGCGGGTTGA
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Protein sequence | MSYQHSYAHS ISDPAAFWAE QAAHLAWHRK PALTLQDNAD GTHRWFADGR LNSCYLALDH QIEQGRGEQL ALIYDSPVTG VQQTYTYNQL RDEVARLAGL LRQLGVNKGD GVIIYMPMVP QAAMAMLACA RIGAVHSVVF GGFAANELAL RIDDARPTLL LTASCGLEFD RVIAYKPLVD RALQLARHQP RNVLVLQRPQ AHAELLPGRD LDWQAALADA EPVAPVELDA GDPLYIMYTS GTTGKPKGIV RENGGNAVAL CYAMRHIYGM QAGDVWWGIS DVGWVVGHSL IVYGPLMSGC TTVFYEGKPI RTPDASAYWR VVEQYRVNAL FCAPTAMRAI RKEDPEGDLI RKHDLSSLRQ LFLAGEKLDS STHEWLERVS GKPVHDHWWQ TETGWPVTAP CVGLEGSAAK PGSSNRAVPG YNVRVLDDEG HLLGANHQGS IVIALPLPPG CSQTLWGDHE RYLQAYLRTY PGYYHTGDGG YLDDDGFVYI MGRTDDVINV SGHRLSTGEM EDLVARHPAV AECAVIGVHD EIKGQVPLAL VVLKDGEGIA EAQLLVELVG SVREEIGPLA CFNRVRLVKR LPKTRSGKIL RAVLRKIADG QDYVPPSTLD DPAVLGEIEA VLADLPRAG
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