Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2350 |
Symbol | |
ID | 1045354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2680385 |
End bp | 2681251 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637145773 |
Product | LysR family transcriptional regulator |
Protein accession | NP_744499 |
Protein GI | 26989074 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000822225 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACATCG AGCAGGCCCG TACCTTCCTG GAAATTGTGC GTTGCGGCAG CCTGGTCGCC GCGGCCGAGC GCCTGTTCGT GTCACAAACC GCGATCACCG CGCGCGTGCA GCGCCTGGAA CAGCAACTGG GTTGCCAGCT GTTCGTGCGT AGCCGCAGCG GCGCCAGCCT GACCAGCGAT GGCGAAGCGT TCGTCAGTTA TGCCAACCAG TTGGTGCAAA CCTGGGAAGC CGCGCGCCGC GACCTGCCGT TGCCTGAAGG TTGCCAGCAG GTGCTGCATG TGGGCGGCGA GGTGAGCCTG GGCAACCCGA TGATGCTCGA CTGGGTAAGT GCCCTGCACC GTGAACTGCC CAGCCATGCC ATCCGCAGCG AGGTCAGCGA CGGAGAATCG CTGCTGCGCA AGGTCGAGAT GGGCTTGCTG GACGCCGCGC TGGTCTACCA GCCGACCTAC GGTCCAGGCC TGCAGGTGGA GCAGTTGATG GAAGAGAAGC TGATTCGCGT GCGCCGGGTC GAGCGGCCCG AGCCGTACAT CTACATCGAC TGGGGCGAGG CCTTCCGCCG CCAGCATGAT GCCGCCCTGC CCGACTGCGC GCGCCCGGCG CTTAGTTTCA ACCTTGGCCC GTTGGCCCTG CAGTTCATAC TCGACCAAGG TGGCAGTGGC TACTTCCGCA CGCGGGTGGT GCAGGCCTAT CTGGACAGCG GCGTGTTCGA GCGGGTACCG CAGGCACCGG AGTTCACCTA CCCGACCTTC CTGGTGTACC CACGCAAACG CGACAGCGAA GCCCTGCAAC AGGCCTTCGC GATCCTGCGC CGGCTGGTAG CTGCCGGCGC CAGCGACTGG TCACAACGCT GGGACCCGGT TATCTGA
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Protein sequence | MDIEQARTFL EIVRCGSLVA AAERLFVSQT AITARVQRLE QQLGCQLFVR SRSGASLTSD GEAFVSYANQ LVQTWEAARR DLPLPEGCQQ VLHVGGEVSL GNPMMLDWVS ALHRELPSHA IRSEVSDGES LLRKVEMGLL DAALVYQPTY GPGLQVEQLM EEKLIRVRRV ERPEPYIYID WGEAFRRQHD AALPDCARPA LSFNLGPLAL QFILDQGGSG YFRTRVVQAY LDSGVFERVP QAPEFTYPTF LVYPRKRDSE ALQQAFAILR RLVAAGASDW SQRWDPVI
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