Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2349 |
Symbol | |
ID | 1045351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2679257 |
End bp | 2680411 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637145772 |
Product | CBS domain-containing protein |
Protein accession | NP_744498 |
Protein GI | 26989073 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.747363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000220473 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCTGCCT CGCGTTCCGA AAGTCGTCTG CAGCGGCTGT TGCCGGCCTC CCTCAACATC CCCCCGAAAG AATGGTTGCG TGCCGGTATC GGTGCGCTGC TTGGCCTGTT CCTCGCGGGC TGGCTGACCA GCCTGGCCTA TGGTCCCAGC ATCGCCCTGC ACTTGCTCGG CCCGCTGGCT GCTTCGGCGG TACTGGTGTT TGCGGTGCAT TCCGGCCCCT TGGCCCAACC TTGGCCGGTG TTGGGCAGCT ACGCCCTGGC GGGTGCAGTG GGGCTGGCCA TGCGCGAAGG CTTCGGCCCC GAGCTGTGGG TGGCTGCTGC GGCGCTCGGC ATCTCGATCC TGGTCATGTG CCTGTTGCGC TGCCTGCACC CGCCGGGTGG CGGTGTGGCA GTGAGCGCGG TGCTGGCCGA CCCGGGGTTG ACCGCTCTGG GCGATCACCT GCTGGAGCCG GTGCTGCTCA ATGCGTTGAT CCTGGTGACA GTGGCAATCG CCTACAACCG TTTGACGGGG GTGCGCTACC CGAAAGGCGC GCTGCCACGC AAAGACCTGC ACCACACCCA TGACCCACTG CCCGGCGAGC GGGTCGGCAT CCGCAGTGAA GACCTGGACC TGGCCCTGGA AGAGCTGGGC GAGTTCGTCG ACGTCAGCCG TGACGAGCTG GAGCGCATCA TCCTCGCCAC TGAGCAGCAC GCCCTGCAGC GCAGCCTTGG TGGTATCACC GCGGCCTCGG TGATGTCCCG CGATGTGCAG TTCGCCACGC CTGATACCAC ACTGGAGCAA GCCTGGAAAA TGCTCGCCAG CCATCACCTG AAAACCCTGC CTGTCCTGCA GCACGGCAAG CTTGTGGGCA TCGTCAGCCT CAGCGACCTG GTTGGCCCGG CGATGCAGCG TGGGCGTTTC AGCTGGCGCG GTCTGTTCGG CCGCCAGGCG GTGCGCATGG CACAAGTGAT GAGCAGGCGG GTTGTCAGTG TCAGCAGCCA GCACCCGTTG GAACGCCTGC TGCCCTTGTT GTGCGAACAA GGCCTGCACT GCTTGCCGGT GCTTGATGGC GACAAGCTGG TGGGGGTGAT CACCCAGACC GACCTGATCG CCGGCCTCAA GCGTCAGTTG CTCAGCAAGA TCGAGGCTTC AGATAACCGG GTCCCAGCGT TGTGA
|
Protein sequence | MSASRSESRL QRLLPASLNI PPKEWLRAGI GALLGLFLAG WLTSLAYGPS IALHLLGPLA ASAVLVFAVH SGPLAQPWPV LGSYALAGAV GLAMREGFGP ELWVAAAALG ISILVMCLLR CLHPPGGGVA VSAVLADPGL TALGDHLLEP VLLNALILVT VAIAYNRLTG VRYPKGALPR KDLHHTHDPL PGERVGIRSE DLDLALEELG EFVDVSRDEL ERIILATEQH ALQRSLGGIT AASVMSRDVQ FATPDTTLEQ AWKMLASHHL KTLPVLQHGK LVGIVSLSDL VGPAMQRGRF SWRGLFGRQA VRMAQVMSRR VVSVSSQHPL ERLLPLLCEQ GLHCLPVLDG DKLVGVITQT DLIAGLKRQL LSKIEASDNR VPAL
|
| |