Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2340 |
Symbol | |
ID | 1045339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2672684 |
End bp | 2673202 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637145763 |
Product | hypothetical protein |
Protein accession | NP_744489 |
Protein GI | 26989064 |
COG category | [R] General function prediction only |
COG ID | [COG3313] Predicted Fe-S protein |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0641884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000153816 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGGCCTGT GTTCCATCGC CAAGCTGTTG TTTTTCATGT CCAACAAGTC CATCAAAACC CCTTGCGTCG GCCTGTGCTC CACGGTGTAC GGAGACACGG TGTGCCGTGG CTGCAAGCGT TTTCACCACG AAGTGATCAA CTGGAACGGC TACGACGACA CGCAGAAGCG CGCCGTGTGG TTGCGCCTTG AGCAACTGCT GGTGCAGGTG ATGATGGCCA AGCTTGAGGT GTTCGACAAA GGCCTGCTGC GCCAGCAACT GGAGCAGCGC TCCATCCGCT TTGTCGAGCA GCAGTCGGCG TATTGCTGGG CTTACCAGCT GATTGCCCGC GGGGCGCGGA TGATCCGTGA CCTGGAGGCC TATGGCATGG TGTTGCTGCC GGAGTTCCGT GACTGGGAAC TGCCCCAATT GCGCGATGCG ATCGATCGCG AGTTCTTCCT GCTTTCAGAG GCGCACTACC AGCGCTATAT CGCCCCCAGC TTCCTGCGCG ATGCCATGGG CAGCGCGCAG GGCCAGTGA
|
Protein sequence | MGLCSIAKLL FFMSNKSIKT PCVGLCSTVY GDTVCRGCKR FHHEVINWNG YDDTQKRAVW LRLEQLLVQV MMAKLEVFDK GLLRQQLEQR SIRFVEQQSA YCWAYQLIAR GARMIRDLEA YGMVLLPEFR DWELPQLRDA IDREFFLLSE AHYQRYIAPS FLRDAMGSAQ GQ
|
| |