| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2334 |
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| Symbol | prpB |
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| ID | 1045329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2661894 |
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| End bp | 2662784 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637145757 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | NP_744483 |
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| Protein GI | 26989058 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.474392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000364152 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGTCA AGAGCACCCC CGGTCAGCGT TTCCGTGACG CCGTTGCCGC TGAGCATCCG
CTGCAGGTGG TTGGCGCCAT CAACGCCAAC CATGCCCTGC TGGCCAAGCG CGCCGGCTTC
AAGGCCATCT ACCTGTCAGG TGGCGGCGTG GCCGCCGGCT CCCTGGGCCT GCCAGACCTG
GGCATCACTG GCCTGGACGA CGTGCTCACT GACGTGCGTC GCATCACCGA CGTGTGCGAC
CTGCCGCTGC TGGTGGATGT CGACACCGGC TTCGGCGCTT CGGCTTTCAA CGTTGCCCGT
ACCGTGCGCT CGATGAGCAA GTTCGGCGCT GCCGCCATCC ATATCGAGGA CCAGGTTGGC
GCCAAGCGTT GCGGCCACCG TCCCAACAAG GAAATTGTCA GCCAGCAGGA AATGGTCGAC
CGTATCAAAG CTGCCGTCGA CGCCCGCAGC GATGACAGCT TCGTGATCAT GGCGCGTACC
GATGCGCTGG CCGTCGAAGG CCTGAACGCC GCCCTGGACC GTGCCCAGGC GTGTGTCGAA
GCTGGCGCCG ACATGATCTT CCCGGAAGCC ATCACCGAAC TGCAGATGTA CAAGACTTTC
GCTGATCGGG TGAAGGCACC GATCCTGGCC AACATCACCG AGTTCGGTGC CACGCCGCTG
TACACAACCG AAGAGCTGGC CTCGGTCGAC GTGTCGTTGG TGCTGTACCC GCTGTCGGCG
TTCCGCGCCA TGAACAAAGC AGCCGAGAAC GTGTATACCG CGCTGCGCCG TGACGGCACG
CAAAAGAATG TGATCGACAC CATGCAGACC CGCATGGAGC TTTACGATGC CATTGGTTAT
CACGCCTTCG AGCAGAGCCT CGATGCACTG TTTGCCCAGA AGAAGGGCTA A
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| Protein sequence | MTVKSTPGQR FRDAVAAEHP LQVVGAINAN HALLAKRAGF KAIYLSGGGV AAGSLGLPDL
GITGLDDVLT DVRRITDVCD LPLLVDVDTG FGASAFNVAR TVRSMSKFGA AAIHIEDQVG
AKRCGHRPNK EIVSQQEMVD RIKAAVDARS DDSFVIMART DALAVEGLNA ALDRAQACVE
AGADMIFPEA ITELQMYKTF ADRVKAPILA NITEFGATPL YTTEELASVD VSLVLYPLSA
FRAMNKAAEN VYTALRRDGT QKNVIDTMQT RMELYDAIGY HAFEQSLDAL FAQKKG
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