Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2318 |
Symbol | |
ID | 1045311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2648013 |
End bp | 2648618 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637145741 |
Product | GDSL family lipase |
Protein accession | NP_744467 |
Protein GI | 26989042 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0286486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000364152 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGAGTGT GGTGGTTGAG TGCCGGTCTG GCCCTGTATT GCCTGGCCCA GAGCGCAGCG GCAGGAACAC TGCTGGTTGT TGGCGATAGT ATCAGCGCCG GTTTTGGCCT GGATAGCCGT CAGGGCTGGG TGTCTCTCTT GCAGGCCCGC CTCAGGGACG AAGGTTTTGA CGAAAAAGTG GTCAATGCTT CGATCAGTGG CGATACCAGC GCAGGTGGAC AGGCGCGGCT GCCGGCGCTG CTTGCAGCAC ATAAACCAAG CCTGGTGGTG CTGGAGCTGG GCGGCAACGA TGGCCTGCGC GGGCAGTCGC CCGCACAATT GCAACAAAAT CTTGCCTCGA TGATCGAGCG TTCGCGTCAG GCAGGGGCCA AGGTGCTGTT ATTGGGCATG CGCCTGCCGC CCAATTATGG TGTGCGTTAC ACCACCGCCT TTGCCAAGGT GTATGAACAG CTGGCAGCGG ACAAACAGGT TCCTTTGGTG CCGTTTTTCC TCGAAGGGGT AGGGGGAGTG CCTGAACTGA TGCAGGCTGA TGGCATCCAT CCGGCCCAGG GGGCTCAGCA GCGCCTGCTG GAAAATGCCT GGCCAGCGAT AAAACCCTTG CTGTGA
|
Protein sequence | MRVWWLSAGL ALYCLAQSAA AGTLLVVGDS ISAGFGLDSR QGWVSLLQAR LRDEGFDEKV VNASISGDTS AGGQARLPAL LAAHKPSLVV LELGGNDGLR GQSPAQLQQN LASMIERSRQ AGAKVLLLGM RLPPNYGVRY TTAFAKVYEQ LAADKQVPLV PFFLEGVGGV PELMQADGIH PAQGAQQRLL ENAWPAIKPL L
|
| |