| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2316 |
|---|
| Symbol | |
|---|
| ID | 1045306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2644812 |
|---|
| End bp | 2647310 |
|---|
| Gene Length | 2499 bp |
|---|
| Protein Length | 832 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637145739 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_744465 |
|---|
| Protein GI | 26989040 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000697167 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTAT CCCGCCTGTG TGGCCTGGCA CTGCGCCAGT TGCTGCGCGA TGTTCGCGCC
AGTGAAGTGC GCGTGCTGTT CTTTGCCCTG TTGGTGGCGG TAGCTGCCAG CACCGCCATC
GGCTATTTCG GCGCCCGCCT AAACGGCGCC ATGCAGCTGC GCGCCAGCGA GTTTCTGGGC
GCCGATCTGG TACTGCAGGG CAGCGCGCCG GCCCGCGAGC AACAGCTCGA TGCCGGCAAG
GCACTGGGCT TGCGCCATGC ACGCGTGGTC GAGTTCACCA GCGTGGTCGG CGGCGACAAT
GGCATCCAGC TGTCCAGCGT AAAGGCCGCC GACGGCGCCT ACCCATTGCG CGGGCAAGTA
CGCAGCGCTC CGGCACCTTA TGCCGAAGAA ACACCCGGCG GCGGCCCTGC CCCTGGCGAA
GTGTGGGTCG AACCACGCCT GTTGGCGGCA CTGGGGCTGG CGATCGGCGA CAGCATCGAC
GTGGGCATCA AAACCCTGCG CATGAGCCGT GTGCTTACCT ACGAACCGGA CCGCGCCAAC
AACTTCTACA GCCTTACCCC GCGCGTGATG ATGAACCTGG CCGACCTGGA AGCCACCGGC
GTGATCCAGC CCGGCAGCCG GGTCACCTAT CGCGACCTGT GGCGCGGCGA TGCCGAGGCG
CTGGCGCAGT ATCGTCAGGC CGTGGAAAAA GACCTGGCCG CCAACCAGCG CCTGCGTGAC
ACCCGTGATG GCAACCAACA GATCGGCGGC GCGCTGGGCA AAGCCGAACG CTACCTGAAC
ATGGCCAGCC TGGTGGCTGT ATTGCTGGCA GGCGTAGCCG TGGCACTGTC GGCCAGTCGC
TATGCTGCAC GCCGGCTGGA CGCCAGTGCC CTGCTGCGCT GCCTGGGCCT GTCGCGCCAC
CAGGCATTGG GCCTGTATTG CCTGCAACTG GCCATGCTCG GCCTGGTCGC TGCCCTGGCC
GGCGCCTTGC TCGGCTGGCT GGCTCAGCTG GGCCTGTTCC GCCTGCTGCA CGGCTTGCTG
CCGAGCGTGG TGCCCGCTGG CGGCATCGTT CCTGCGCTGG CAGGTATCGG TACCGGGCTG
GTGGCACTGG CTGGCTTTGC CCTGCCGCCG ATTGCAGCGC TGGGCCAGGT GCCGCCACTG
CGCGTGCTGC GCCGTGACCT GCTGCCGATA CCTGCGAGCA GTTGGCTGGT GTACGGCGCC
GCCCTGCTCG CCCTGGGCCT GATCATGTGG CGCCTGAGCC TCGATCTGCT GCTCACCTTC
GCCCTGCTCG GTGGCGGCCT GGTCGCTGCA CTTCTGCTCG GCGGCCTGCT GTTGCTCGGT
TTACGCAGCC TGCGCCAGCT GCTGGCCGGT GCGCCACTCA CCTGGCGCCT GGGGCTGGGC
CAGCTATTGC GCCACCCCAC GGCGGCAGCA GGCCAGGCCC TGGCATTCGG CCTGATACTG
CTGGCCATGG CCTTGGTCGC CCTGCTGCGC GCAGAGCTGC TCGATACCTG GCAAGCACAG
CTACCCAAGG ATGCGCCTAA CCACTTCGCC CTGAACATCC TGCCAGATGA CCGTGAGCCG
TTCATTCAAC ACCTGCACCA GGTCAATGCC GCCTCAGCGC CGCTGTACCC GGTGACGCCC
GGGCGCCTGG TGCAAATCAA CGAAAAACCG GTACAGCAGG TGGTCAGCAA GGACTCGGCA
GGCGAGCGCG CCGTGCAGCG CGACCTCAGC CTGACCTGGG CCGCCGAGTT GCCCGAAGGC
AACGTGCTGA CCGCAGGCAG TTGGTGGCCA GCCTTGCCAG CCGACAACGA TATCCCCGGG
GTTTCGGTGG AGGCGGAACT GGCCAGCAGC CTGAAACTGC AGATGGGCGA CCTGCTGACG
TTCGATATTG GCGGCCAGCA GCGCCAGGCC CGCGTCAGCA GCCTGCGCAA CGTGCATTGG
GACAGCTTCC AGCCGAACTT CTACATGATC TTCCAGCCTG GCACGCTGCA GGGGCTGCCG
ACCACTTACC TGACCAGCTT CTACCTGGCA CCGGGGCATG ACCTGGATGT CGTCGCGCTG
TCACGGGCGT TTCCGGCGGT GACCATCCTG CAGGTGGATG CCTTGCTCGA CCAGCTGCGC
AGCATTCTCG CGCAGGTAAC CCTGGCGGTG GAGTATGTGT TGCTGTTCGT GCTGGCCGCC
GGGCTGGCAG TGCTGTTCGC CGGCTTGCAG GCCACGCTGG ATGAGCGCAT TCGCCAAGGG
GCACTGTTGC GCGCACTGGG CGCGGCGCGG CCGTTGCTGG TCAAGGCCCG GCGAATCGAG
TTCGGCCTGC TGGGTGCGGC CAGCGGGCTA TTGGCGGCCG TGGGCTGCGA ACTGATTACC
TGGGTGCTGT ACCGCTATGC CTTCGATTTG CAGTGGAGCC CGCACCCGTG GCTGCTGGTG
TTGCCGCTGA CGGGGGCACT GCTGGTGGGT GGTGCTGGGG TGCTGGGAAC ACGGCGGGCG
TTGAATGCCA GCCCGCTGGC GGTGTTGCGC GAGGCTTGA
|
|---|
| Protein sequence | MPLSRLCGLA LRQLLRDVRA SEVRVLFFAL LVAVAASTAI GYFGARLNGA MQLRASEFLG
ADLVLQGSAP AREQQLDAGK ALGLRHARVV EFTSVVGGDN GIQLSSVKAA DGAYPLRGQV
RSAPAPYAEE TPGGGPAPGE VWVEPRLLAA LGLAIGDSID VGIKTLRMSR VLTYEPDRAN
NFYSLTPRVM MNLADLEATG VIQPGSRVTY RDLWRGDAEA LAQYRQAVEK DLAANQRLRD
TRDGNQQIGG ALGKAERYLN MASLVAVLLA GVAVALSASR YAARRLDASA LLRCLGLSRH
QALGLYCLQL AMLGLVAALA GALLGWLAQL GLFRLLHGLL PSVVPAGGIV PALAGIGTGL
VALAGFALPP IAALGQVPPL RVLRRDLLPI PASSWLVYGA ALLALGLIMW RLSLDLLLTF
ALLGGGLVAA LLLGGLLLLG LRSLRQLLAG APLTWRLGLG QLLRHPTAAA GQALAFGLIL
LAMALVALLR AELLDTWQAQ LPKDAPNHFA LNILPDDREP FIQHLHQVNA ASAPLYPVTP
GRLVQINEKP VQQVVSKDSA GERAVQRDLS LTWAAELPEG NVLTAGSWWP ALPADNDIPG
VSVEAELASS LKLQMGDLLT FDIGGQQRQA RVSSLRNVHW DSFQPNFYMI FQPGTLQGLP
TTYLTSFYLA PGHDLDVVAL SRAFPAVTIL QVDALLDQLR SILAQVTLAV EYVLLFVLAA
GLAVLFAGLQ ATLDERIRQG ALLRALGAAR PLLVKARRIE FGLLGAASGL LAAVGCELIT
WVLYRYAFDL QWSPHPWLLV LPLTGALLVG GAGVLGTRRA LNASPLAVLR EA
|
|---|
| |