Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2300 |
Symbol | clpP |
ID | 1045280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2628336 |
End bp | 2628977 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637145723 |
Product | ATP-dependent Clp protease proteolytic subunit |
Protein accession | NP_744449 |
Protein GI | 26989024 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00410686 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCCGCA ATTCTTATAT TCAGCAGAGC TCTGACATCC AGGCCGCAGG CGGCCTGGTC CCGATGGTTA TCGAGCAGTC CGCCCGTGGC GAACGCGCTT ACGACATCTA CTCGCGCCTG TTGAAGGAGC GTGTGATCTT CCTGGTTGGC CCGGTAGAGG ACTACATGGC CAACCTCGTC GTTGCGCAAC TGCTGTTCCT TGAGGCGGAA AACCCGGACA AGGATATCCA TCTGTACATC AACTCGCCGG GCGGTTCCGT CACCGCCGGC ATGTCGATCT ACGACACCAT GCAGTTCATC AAGCCGGACG TTTCGACCAT CTGCATCGGC CAGGCCTGCA GCATGGGCGC CTTCCTGCTG GCGGCAGGTG CCAAGGGCAA GCGTCATTGC CTGCCTAACT CGCGCGTGAT GATCCACCAG CCGCTGGGCG GCTTCCAGGG TCAGGCCACC GATATCGAGA TCCACGCCCA GGAAATTCTC AATATCAAGG CCCGTCTGAA CGAGCTGCTG GCCTATCACA CCGGCCAGGA CCTCGAGACC ATCAAGCGTG ACACCGAGCG TGACAACTTC ATGAGCGCCT CGCGCGCAGC CGAGTACGGC CTGATCGACT CGGTCTACGA CAAGCGGCAA CTGGCCTCCT GA
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Protein sequence | MSRNSYIQQS SDIQAAGGLV PMVIEQSARG ERAYDIYSRL LKERVIFLVG PVEDYMANLV VAQLLFLEAE NPDKDIHLYI NSPGGSVTAG MSIYDTMQFI KPDVSTICIG QACSMGAFLL AAGAKGKRHC LPNSRVMIHQ PLGGFQGQAT DIEIHAQEIL NIKARLNELL AYHTGQDLET IKRDTERDNF MSASRAAEYG LIDSVYDKRQ LAS
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