| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2297 |
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| Symbol | |
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| ID | 1045276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2624995 |
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| End bp | 2625819 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637145719 |
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| Product | integrative genetic element Ppu40, integrase |
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| Protein accession | NP_744446 |
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| Protein GI | 26989021 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.880812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.023746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTCA ATGGCGGCAA CGTGCTGAAA GCACTTGGGG CCGACACGCT GCTGAGCGAT
ATCACGACCG AGGCCATCAC CGAAATGGTC CTGGAGTTTG AGGACTTGGG CAACTCTGGT
TCGACCGTGA ACCGCAAGCT GTCGCTTCTT TCTATGGTCC TCAAGACCGC TGTGAACCAC
AACTGGCTCC TCAGCGTGCC ACGTATGATC CGCCGTAAAG AGGGCAAGCA CCGTATCCGC
TGGATGAACA CGGAGGAGGA GGGCAACGTC CTAAAGGCGT GCCAGCACCT GGGGCTCAAC
TGCCTTCACG ACTTCATCAT TGTGGCGGTC GATACAGGGT TCCGCCGCGC TGAACTCCTC
GGGCTCAGTG CTCCTGACTT CCAGGAAGGG ATGATTCACC TGTACGCCGG ACAGACCAAG
AACGGAGACG CCCGTGCCAT CCCGGCTACC AGTCGCGTGG CGCGCATCCT GCACCGCAGG
CGGATGAACC TGACTACCTT TGAAGGGCTC ACCGTTTCGT CTTTGCGTCA CCAGTGGGCC
ACTCTGCGCG CCTACATGGG CATGGAAGAA GACCCGCAGT TCATCGTTCA CATGCTTCGC
CACACCTGCG CTTCGCGCCT GGTACAGCGC GGCGTCCCAT TGGCCTCCGT CCAGCATTGG
ATGGGCCACA AGAACATCAA CACGACACTC CGGTACGCGC ATCTGGCACC GGAAAATCTG
ATGCAGGCGC GCAATGCGCT AGAGGCAGCA CCGGCACAGC CGACCGCTTT TGAGTCGGTA
GAGCGCGACA CGTTCTTCAA CTATGGTGAG GCTACAACGG CCTAG
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| Protein sequence | MTLNGGNVLK ALGADTLLSD ITTEAITEMV LEFEDLGNSG STVNRKLSLL SMVLKTAVNH
NWLLSVPRMI RRKEGKHRIR WMNTEEEGNV LKACQHLGLN CLHDFIIVAV DTGFRRAELL
GLSAPDFQEG MIHLYAGQTK NGDARAIPAT SRVARILHRR RMNLTTFEGL TVSSLRHQWA
TLRAYMGMEE DPQFIVHMLR HTCASRLVQR GVPLASVQHW MGHKNINTTL RYAHLAPENL
MQARNALEAA PAQPTAFESV ERDTFFNYGE ATTA
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