| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2270 |
|---|
| Symbol | |
|---|
| ID | 1045167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 2591620 |
|---|
| End bp | 2593254 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637145692 |
|---|
| Product | DNA primase/helicase |
|---|
| Protein accession | NP_744419 |
|---|
| Protein GI | 26988994 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.411538 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0115739 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCCATGA AAAATCGAAA GCATGAAACA GTGAGTGAGT TCGTGCGCCA CCTGCCCTGT
GAAAACTGTG GTTCAAGTGA TGCCAACTCT ATCTATACCG ACAACCACCA ATATTGCTTC
GCCTGTGAGC ACTACGTTCA CGGTGATGGC GAAACCCCAA CTACTGGAGG GCGAACAAAA
CGAATGGAAG GTTTAATCTC CGGCGAATTC AAGCCGCTGA TGAAGCGCAA ACTTACCCTG
GAAACTTGCC GCAAGTTCGG ATACTTCGTA AGTGAGGTGC GTGGCAGGCT AGTTCAAGTT
GCCCCTTACT TCGACAACAG TGGTGTGATG GTCGCCCAAA AACTGCGCGA TCAGGATAAA
GGCTTCGCCA TCCTGGGCGA TGGTGCAAAG TTGACCCTCT TCGGCCAGAA CCTTTGGGCG
AGTGGGGGCA AGAAGATTGT TGTCACCGAA GGCGAGCTGG ACGCTATGTC TGTCTCCCAG
GTGCAAAACA ACAAGTGGCC CGTGGTGTCG CTCCCGAACG GGGCTCCGGC AGCACGCAAG
GCCATCCAGC GAAACATCGA ATATCTGGAG AGCTTCGAAG AAGTCATCCT CATGTTCGAT
ATGGACGAAC CGGGCCGCGA AGCAGCGCAG GAATGCGCAG AGCTATTCAG CCCAGGCAAG
TGCAAGATCG CCACGCTATC CATGAAGGAC GCCAACGAAC TTCTGGTAGC GGGCCGTGAG
CAGGAAATCG TCACCGCCAT CTGGAACGCC AAGCTGTACC GGCCTGATGG TGTAGTGAAC
GTCCGAGACC TCCTCGAAGA GATTCGCAAG GCCCTGGTCA TGGGCTTGCC GTGGTTCCTT
GATCCACTCA CCCAACTCAC CTATGGACGC CGCTACGGCG AAGTCTACGG GCTGGGCGCT
GGTACTGGTG TGGGCAAGAC CGACTTCCTC ACGCAGCAAA TCGCATACGA CATCCAAGTC
CTGGGCGAGC GTGTAGGCAC CATTTTCCTG GAGCAGAAAC CGACCGAGAC CGCCAAGCGC
GTGGCCGGGA AGATCGCCGG GAAACGCTTC CACGTTCCCA AGGACACCGC TGGCTGGACC
GATGAGGAGC TGGATGCAGC CGTAGATGCG CTGGGCGAAA ACCTGGTCAT GTACGACGCA
TTTGGTGAAA CCGAGTGGGA CATTGTGAAG CGCAAGGTGC GCTACATGGC TGTCTCCGAG
GGCATCAAGC TTATCTACAT TGACCACCTC ACTGCGATGG CTGACACCGC AGATGAGAAG
GGCTCGCTTG AGCAGATCAT GAAAGAGATG GCGGGCCTGG CGAACGAGCT GGGAATCATC
ATCACGTTCA TCTCTCACCT GACCACCCCC GAGGGCAAAC CCCATGAGGA AGGCGGGCGG
GTAACGATTC GCCACTTCAA AGGCTCCCGA GCCATCGGCT TCTGGAGCTA CTTCATGTTC
GGCCTTGAGC GTGACCAACA GGCCGAAGAC CCCGTGGTTC GCCAAACCAC CACCTTCCGC
ATCCTCAAGG ACCGCTACAC CGGCCAAGCG ACCGGGGAAG TGCTGTACCT GGCATACGAC
CGCGACACCG GATTGCTCTC GCTCACCGAA GCGCCCGAGC CGTCCTCACC CTTTAAAGAT
GAATCCGAAT TCTGA
|
|---|
| Protein sequence | MPMKNRKHET VSEFVRHLPC ENCGSSDANS IYTDNHQYCF ACEHYVHGDG ETPTTGGRTK
RMEGLISGEF KPLMKRKLTL ETCRKFGYFV SEVRGRLVQV APYFDNSGVM VAQKLRDQDK
GFAILGDGAK LTLFGQNLWA SGGKKIVVTE GELDAMSVSQ VQNNKWPVVS LPNGAPAARK
AIQRNIEYLE SFEEVILMFD MDEPGREAAQ ECAELFSPGK CKIATLSMKD ANELLVAGRE
QEIVTAIWNA KLYRPDGVVN VRDLLEEIRK ALVMGLPWFL DPLTQLTYGR RYGEVYGLGA
GTGVGKTDFL TQQIAYDIQV LGERVGTIFL EQKPTETAKR VAGKIAGKRF HVPKDTAGWT
DEELDAAVDA LGENLVMYDA FGETEWDIVK RKVRYMAVSE GIKLIYIDHL TAMADTADEK
GSLEQIMKEM AGLANELGII ITFISHLTTP EGKPHEEGGR VTIRHFKGSR AIGFWSYFMF
GLERDQQAED PVVRQTTTFR ILKDRYTGQA TGEVLYLAYD RDTGLLSLTE APEPSSPFKD
ESEF
|
|---|
| |