| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2264 |
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| Symbol | |
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| ID | 1045157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2582771 |
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| End bp | 2584510 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637145683 |
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| Product | extracellular solute-binding protein, family 1 |
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| Protein accession | NP_744413 |
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| Protein GI | 26988988 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.864304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00109234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTCGACA ACAAACACAA CAGGCGACAT TTGACCCTGG CCGCGTTGCT GGTACTGGCC
AGCGTGCAAG GCACAGCCTG GGCCGACCAG TACGAAGAGG CGGCAAAGAA ATGGATCGGC
AGCGAGTTCA AGCCTTCGAC CCTTACCCCC GAACAGCAGT TGGCCGAATT GCAGTGGTTC
ATCAAGGCAG CCGAGCCGTT TCGCGGGATG AAGATCAATG TTGTGTCGGA AACCATCACC
ACCCATGAAT ACGAATCCAA GGTGCTGGCC AAGGCTTTCA GTGAGATCAC CGGCATCCAG
CTGACCCACG ACCTGCTGCA GGAAGGCGAC GTGGTGGAAA AACTGCAGAC GCAGATGCAG
TCGGACAAGA ACATCTATGA CGGCTGGGTC AACGACTCCG ACCTGATCGG TACGCACTTT
CGCTACGGCA AAGTGGAATC GATCACCGAC CTGATGGCCA ACGAGGGCAA AGCCTATACT
TCGCCGACCC TCGACCTGAA GGACTTCATC GGTATTTCCT TCACCACCGC GCCTGATGGC
AAGGTCTACC AACTGCCCGA CCAGCAGTTC GCCAACCTGT ACTGGTTCCG CGCCGACTGG
TTCGAGCGGC CGGAGTTGAA GGCCAGGTTC AAAGAGAAGT ACGGCTATGA ACTGGGGGTG
CCAGTGAACT GGTCGGCGTA CGAGGACATT GCCAAGTTCT TCACCGAAGA CGTCAAGGAG
ATCGACGGCA AGCGCGTCTA CGGGCACATG GACTACGGAA AGAAAGACCC GTCACTGGGC
TGGCGCTTCA CCGATGCCTG GTTCTCGATG GCCGGCGGCG GCGACAAGGG CCTGCCCAAT
GGTTTGCCGG TCGATGAATG GGGCATTCGC GTGGAGGACT GCCATCCGGT GGGTTCCAGC
GTGACCCGCG GCGGCGATAC CAATGGGCCG GCCGCCGTCT ATGCCACGCA GAAGTACGTG
GACTGGATGC GTGCTTACGC GCCCAAGGAA GCGCAGGGCA TGACATTCTC CGAAGCCGGC
CCTGTGCCGG CGCAAGGCAA CATTGCCCAG CAGATATTCT GGTACACCGC ATTCACCGCC
GACATGACAA AGCCCGGCTT GCCGGTCGTG AATGCCGACG GCACGCCGAA GTGGCGCATG
GCGCCTTCAC CGAAGGGGCC TTACTGGGAA GAGGGGATGA AACTCGGCTA CCAGGACACT
GGCTCGTGGA CCTTCTTCAA GTCCACCCCC GAGAAGCAAC GCTTGGCGGC GTGGCTGTAC
GCCCAGTTCG TCACCTCAAA GACCGTATCG CTGAAAAAGA CCATCGTCGG CCTGACGCCG
ATTCGTGAGT CGGACATCAA CTCCCAGGCC ATGACCGAGT TGGCGCCCAA GCTCGGTGGG
CTGGTGGAGT TCTATCGCAG CCCTGCACGG GTGCAGTGGA CGCCGACCGG CACCAACGTG
CCGGACTACC CGCGGCTGGC GCAGCTGTGG TGGAGCCATA TCGCCGAAGT CGCCAGTGGC
GAAAAGACCC CGCAGGAAGC CCTGGATGGG CTGGCCCGCG ACCAGGACCG CATGATGGAG
CGCCTGCAAC GCTCCAATGC CCAGGCGACG TGTGCACCCA AGTTGAATCC GGAGAAGGAC
GCCCAGTACT GGTTCGACCA GCCGGGTGCG CCGAAAGCCA AGCTGGCCAA CGAAAAGCCC
ATGGGCGAGA CAGTCAGCTA CAACGAACTG CTGAAGTCCT GGGAGGCGGC CAGGAAGTGA
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| Protein sequence | MFDNKHNRRH LTLAALLVLA SVQGTAWADQ YEEAAKKWIG SEFKPSTLTP EQQLAELQWF
IKAAEPFRGM KINVVSETIT THEYESKVLA KAFSEITGIQ LTHDLLQEGD VVEKLQTQMQ
SDKNIYDGWV NDSDLIGTHF RYGKVESITD LMANEGKAYT SPTLDLKDFI GISFTTAPDG
KVYQLPDQQF ANLYWFRADW FERPELKARF KEKYGYELGV PVNWSAYEDI AKFFTEDVKE
IDGKRVYGHM DYGKKDPSLG WRFTDAWFSM AGGGDKGLPN GLPVDEWGIR VEDCHPVGSS
VTRGGDTNGP AAVYATQKYV DWMRAYAPKE AQGMTFSEAG PVPAQGNIAQ QIFWYTAFTA
DMTKPGLPVV NADGTPKWRM APSPKGPYWE EGMKLGYQDT GSWTFFKSTP EKQRLAAWLY
AQFVTSKTVS LKKTIVGLTP IRESDINSQA MTELAPKLGG LVEFYRSPAR VQWTPTGTNV
PDYPRLAQLW WSHIAEVASG EKTPQEALDG LARDQDRMME RLQRSNAQAT CAPKLNPEKD
AQYWFDQPGA PKAKLANEKP MGETVSYNEL LKSWEAARK
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