Gene PP_2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2263 
Symbol 
ID1045156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2581646 
End bp2582446 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content61% 
IMG OID637145682 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionNP_744412 
Protein GI26988987 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000192828 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCACAC GCAAATCAAT GGCCCTGCTG CTGTACTTCT TCTTCCTGCT GGTGCCGATC 
TACTGGTTGC TGAACATGTC GTTCAAGAGC AACGCCGAGA TCCTTGGCGG CCTGACCCTG
TGGCCGCAGG CGTTCACGCT CGACAACTAC CGAGTGATCT TCACCGACGC CAGCTGGTAC
AGCGGCTACA TCAACTCGCT GTACTATGTG TGCCTGAACA CGCTGATTTC ACTGCTCGTG
GCGTTGCCCG CGGCCTATGC GTTCTCGCGC TACCGCTTTC TCGGCGACCG CCACCTGTTC
TTCTGGCTGC TGACCAACCG CATGGCGCCA CCGGCGGTGT TCCTGCTGCC GTTCTTCCAG
TTGTACTCGT CGATCGGGCT GTTCGATACC CACATTGCCG TGGCGCTGGC CCATTGCCTG
TTCAACGTAC CGCTGGCGGT GTGGATCCTG GAGGGTTTCA TGTCGGGCGT GCCAAGGGAA
ATCGACGAAA CCGCCTACAT CGACGGCTAC AGTTTTCCGC GCTTCTTCGT GAAGATCTTC
ATACCGCTGA TTGGCTCCGG CATCGGCGTC ACGGCGTTTT TCTGTTTCAT GTTCTCCTGG
GTCGAACTGC TGCTGGCGCG CACCCTGACC TCGGTGAATG CCAAGCCGAT TGCCGCGGTG
ATGACCCGCA CGGTGTCGGC ATCGGGCATC GACTGGGGTG TGCTGGCGGC GGCGGGGGTG
CTGACCATCT TGCCGGGCAT GCTGGTGATC TGGTTCGTGC GCAATCATGT GGCCAAGGGC
TTCGCCCTGG GCCGGGTGTG A
 
Protein sequence
MSTRKSMALL LYFFFLLVPI YWLLNMSFKS NAEILGGLTL WPQAFTLDNY RVIFTDASWY 
SGYINSLYYV CLNTLISLLV ALPAAYAFSR YRFLGDRHLF FWLLTNRMAP PAVFLLPFFQ
LYSSIGLFDT HIAVALAHCL FNVPLAVWIL EGFMSGVPRE IDETAYIDGY SFPRFFVKIF
IPLIGSGIGV TAFFCFMFSW VELLLARTLT SVNAKPIAAV MTRTVSASGI DWGVLAAAGV
LTILPGMLVI WFVRNHVAKG FALGRV