| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2259 |
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| Symbol | |
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| ID | 1045152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2576616 |
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| End bp | 2578391 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637145678 |
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| Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | NP_744408 |
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| Protein GI | 26988983 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.026618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA TCACACAGGA CAGGCCCATG GCCGCATCCG CTTCGACCCA CACCCAACTG
ATCCAGGCGT CCTGGGACCG CTGCCGCGCC CACGGCCTGC AGCCGCAGCA TGCGCCAGAC
TTTGACTGCC TGTCCCGCGC CGAGCTCAGT GCCCTGCTGG AGCGGCGCCA AAACCTGCTG
CGCCTGACCC GCGAGGAAGT GCTACCGCAC TATGCGCACC TCTTGGGTAA CGCCAGCTAC
CTGGTAATGC TGGCCGATGC CAGCGGCTGC CTGCTCGACA GCTGGGGCTC GCGGCGTTTC
ATCGAACCGC GCCAGCACCA TGGTTTCAGC GCCGGCGCCC ATTGGCACGA ACGTGGCGTC
GGCACCAATG CCCTGGGCAC CACACTGATT TGCGCCGAAG CGGTTCACGT CGGCCAGGAC
GAACACTTCC TGCGCCAGAA CCGCTACATG TCCAGCGCCG CCGCCCCCCT GTTCGACGCC
GCACGGCAGC TGGTCGGGGC GCTCGACGTA GCCAGCGACG GCTACCTGCC GGCCAGCCAG
ACGCTTGGGC TGGTGCGCAT GATGGGCCAG AGCCTGGAAA ACCGCCTGAT CCTCGCCGAA
CATGCTGACC AGCATGCACA ACTGATCTTC AACAGCGCCT CCGACAACCT CGACAGCCCT
TGGGCCGGCT TGCTGGTGTT CGATGAACGC GGGCAGGTTT TGGCCGCCAA CCACCGGGCC
GATAGCCTGC TTGGCGTAAA CCCGCTGCAG CAAAACATCG AGCAACTGTT CCAGTTACCC
CTGCAACAGC TGCTCAGCCA TCCCCGACAA CAGCCCTTCG CTCTGCAGGC CACCGGGCGC
AACCGCTTTC ACTGCCAGTG GCACCCCCCA CGCGAAACCA CTCGCCGCCC CGAAGCCGGC
AGTGCCGAGC CGCGCCTGGA AAAAGCCTTG ATACAAGCCG GCCTGCTATT GGAAAAGGAC
ATCCCGGTGT TGGTCGAGGG CGAAACAGGC GTAGGCAAAG AAGTGTTCGT CGACGCCCTG
CACCGGGCCA GCAGCCGCGC CAGGCAGCCG CTGGTCGCCG TAAACTGTGC GGCGATCCCG
GCCGAACTGG TGGAGTCGGA ACTGTTCGGC TATGACAAAG GCGCGTTCAC CGGCGCCCAC
CACAAGGGCA ACCCGGGACT GATCCGCAAG GCCGACCACG GCATCCTGTT TCTGGATGAG
ATTGGCGACA TGCCACTGCC CACCCAGGCC CGCCTGCTGC GCGTACTGCA GTCGCGCAGC
ATCCAGCCGC TGGGCAGTGG CGAACCGGTG CCGGTGGATA TCCGCGTGGT GTCGGCGAGC
AATCGCAACC TGGCCGACGA AGTGCGCGCC GGGCGCTTTC GCCAGGACCT GTACTACCGC
ATCGCCGGCC TGACGCTGGT GCTGCCTCCC CTGCGCGAAC GCGCTGACCG GCGCCAGCTG
ATTGAGCAGG TGCATGCCCG CTACCGCGAG CCCGGGCAAC CTGCGCGGCT GCCGCCGGCC
ATTATCGACC TGTTCGATCA ACACCCCTGG CCGGGCAACC TGCGCGAACT GGTGAGCGTG
CTACAGGTCG CGTTGGCCCT GGCGGCCAAC GGGCCGGTCG GCGTCGAGCA CCTTCCAGCG
GGCTTTCTGG CCGAGTCGAA AACACCGGTG CCGATAGCGA CTGAAGAGAC GGACCTGCAG
AGCCTGGTCG AGCAAGCCAA TGGCAACCTG TCGGCGGTGG CCCGCCGACT TGGTATCAGC
CGCACCACAC TGTACAAGCG GTTGCGTGGG CGATGA
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| Protein sequence | MTTITQDRPM AASASTHTQL IQASWDRCRA HGLQPQHAPD FDCLSRAELS ALLERRQNLL
RLTREEVLPH YAHLLGNASY LVMLADASGC LLDSWGSRRF IEPRQHHGFS AGAHWHERGV
GTNALGTTLI CAEAVHVGQD EHFLRQNRYM SSAAAPLFDA ARQLVGALDV ASDGYLPASQ
TLGLVRMMGQ SLENRLILAE HADQHAQLIF NSASDNLDSP WAGLLVFDER GQVLAANHRA
DSLLGVNPLQ QNIEQLFQLP LQQLLSHPRQ QPFALQATGR NRFHCQWHPP RETTRRPEAG
SAEPRLEKAL IQAGLLLEKD IPVLVEGETG VGKEVFVDAL HRASSRARQP LVAVNCAAIP
AELVESELFG YDKGAFTGAH HKGNPGLIRK ADHGILFLDE IGDMPLPTQA RLLRVLQSRS
IQPLGSGEPV PVDIRVVSAS NRNLADEVRA GRFRQDLYYR IAGLTLVLPP LRERADRRQL
IEQVHARYRE PGQPARLPPA IIDLFDQHPW PGNLRELVSV LQVALALAAN GPVGVEHLPA
GFLAESKTPV PIATEETDLQ SLVEQANGNL SAVARRLGIS RTTLYKRLRG R
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