| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2255 |
|---|
| Symbol | |
|---|
| ID | 1045147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2571123 |
|---|
| End bp | 2572433 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637145674 |
|---|
| Product | C4-dicarboxylate transporter DctA |
|---|
| Protein accession | NP_744404 |
|---|
| Protein GI | 26988979 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.16569 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0457753 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAAT GGTGCTCGCG TTCGATTTTC CTGCAAGTCG TACTCGGCCT TGCCCTCGGC
ATCGCCTGCG GTCTGAGCTT CCCCGACCTC TCCCTGCAAC TCAAACCCCT CGGCGACGGC
TTCATCAAGC TGATCAAGAT GCTCATCGGC CTGATCGTGT TCTGCGTGGT GGTCAGCGGC
ATTTCGGGTG CGGGCGACCT GAAAAAGGTC GGGCGTATCG GCCTGAAGTC GGTGATCTAC
TTCGAAGTGC TGACTACCCT GGCGCTGGTG ATCGGCCTGG TGTTCGCCTT CACCAGTGGC
ATTGGCAGCG GTGCCAATAT TCACCTGGAT CAACTGTCCG CCGCCGATGC CAACGGCTTG
GCCGAGCGCG GCCAGCACAT CCATGGCGCC ACGGCGTTCT TCATGGACCT GATCCCCACC
TCGGTGATCG GTGCCTTCGC CGACAACAAC ATTCTTCAGG TGCTGCTGTT CTCGGTGCTG
TTCGGCAGCG CCCTGAACCT GGTGGGTGAC TCGGCCGCCG GCATTTCGCG ACTGATCAAC
GAACTGAGCC ATGTGATCTT CCGCATCATG GGCATGATCG TGCGCCTGGC GCCGATCGGC
GTGTTCGGTG CCATCGCCTT CACCACCAGC AAGTACGGCC TGGCGTCGCT GCAGCACCTG
GGCGGGCTGG TGGCGCTGTT CTACCTCACC TGTGCCGGCT TCGTGCTGAT CGTGCTGGGC
ACCGTCATGC GCCTGTCGGG CTTGAAACTG CTGCCGTTGA TCAAGTACCT GCGCGAAGAG
CTGACCATCG TCCTGGGCAC CGCCTCTTCC GACGCCGTGC TGCCACAGAT CATGCGCAAG
CTTGAGCACC TGGGCATCGG CAGTTCCACG GTCGGCCTGG TGATCCCTAC CGGCTACTCG
TTCAACCTCG ATGGTTTTTC CATCTACCTC ACCCTGGCGA TCGTGTTCAT CGCCAACGCC
ACCGGCACGC CACTGGAAAT GACCGACCTG CTGACCATCC TGCTGGTGTC GCTGGTGACT
TCCAAGGGGG CTCACGGCAT CCCAGGCTCG GCACTGGTGA TTCTTGCCGC CACCCTGACT
GCGGTACCGG CGATCCCTGT GGTTGGCCTG GTACTGGTGC TGGCGGTGGA CTGGTTCATG
GGTATCGGCC GGGCGTTGAC CAACCTGATC GGCAACTGCG TGGCCACCGT GGCCATTGCC
CGTTGGGAGA AGGACATTGA CCTGGAACGT GCGCAGAACG TGCTCGACGG CAAGCCTGGC
TTTGCCCCCA CGCCACGCAA GCAACCCAGC GCCCATCAAC AGGAATTCTG A
|
|---|
| Protein sequence | MLKWCSRSIF LQVVLGLALG IACGLSFPDL SLQLKPLGDG FIKLIKMLIG LIVFCVVVSG
ISGAGDLKKV GRIGLKSVIY FEVLTTLALV IGLVFAFTSG IGSGANIHLD QLSAADANGL
AERGQHIHGA TAFFMDLIPT SVIGAFADNN ILQVLLFSVL FGSALNLVGD SAAGISRLIN
ELSHVIFRIM GMIVRLAPIG VFGAIAFTTS KYGLASLQHL GGLVALFYLT CAGFVLIVLG
TVMRLSGLKL LPLIKYLREE LTIVLGTASS DAVLPQIMRK LEHLGIGSST VGLVIPTGYS
FNLDGFSIYL TLAIVFIANA TGTPLEMTDL LTILLVSLVT SKGAHGIPGS ALVILAATLT
AVPAIPVVGL VLVLAVDWFM GIGRALTNLI GNCVATVAIA RWEKDIDLER AQNVLDGKPG
FAPTPRKQPS AHQQEF
|
|---|
| |