Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2245 |
Symbol | |
ID | 1045129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2561552 |
End bp | 2562145 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145664 |
Product | Cro/CI family transcriptional regulator |
Protein accession | NP_744394 |
Protein GI | 26988969 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.492638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.683994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCAG CTCTTCCCCA GCTTGACCGT GCCGTCGTCG GCCAGCGCCT GCGCCAGGTG CGCAAGGCGC GCCAGATGAC CCTCAAGCAA TTGTCCGAAG CCAGTGGCGT GCCGCTGTCC ACGTTGTCGA AGATGGAACT GGCACAGGTG TCGGTCAGCT ATGAAAAACT GGCCGCTGCT GCGCGGGCGC TGAATGTCGA TATTGCCCAG CTGTTCCGCG CCAGCGGCAC GGTCAGTGCC CCGGTGCCGG TGACCGTGGT GGTCGACTCA CTGCCCGCAG CGGCGGGTTA TTCGACCGGC ACCTACGACT ATTATCCGAT TGCCGGGGAT TTCCCCGCAC GACGCATGAC ACCGGCCTAT GCCCGCATCA TTGCCCGGGA ACGCGGCCAG TTCGACGATT TTATCCGCCA CCCCGGGCAA GAGTTCGCGC TGGTGCTGAG CGGGCGCGTG CGCATCGAGT TCGAGACCGG AGAAGCGGTC AGCATCGGGC CGCAGGAGAC TGCGTATTTC GACAGCCAGG TGGGGCACAT CTACCTGTCG GAAAGCGATG ACGGTGGTGA TGCCCATGTC ATGGTAGTGA TGACCGATCG TTGA
|
Protein sequence | MPAALPQLDR AVVGQRLRQV RKARQMTLKQ LSEASGVPLS TLSKMELAQV SVSYEKLAAA ARALNVDIAQ LFRASGTVSA PVPVTVVVDS LPAAAGYSTG TYDYYPIAGD FPARRMTPAY ARIIARERGQ FDDFIRHPGQ EFALVLSGRV RIEFETGEAV SIGPQETAYF DSQVGHIYLS ESDDGGDAHV MVVMTDR
|
| |