Gene PP_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2233 
Symbol 
ID1045106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2540833 
End bp2541381 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content64% 
IMG OID637145647 
Productisochorismatase superfamily hydrolase 
Protein accessionNP_744382 
Protein GI26988957 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.668732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC AGGCACTGAT CATCATCGAC ATCCAGAACG ACTACTTCCC CGGCGGCAAG 
TGGCCCCTCG ATGGCGTCGA CCAGGCAGCC GACAACGCCG CCCGCCTGCT GGCAGCAGCA
CGCCAGCGCG GCGACCTGGT GGTGCATGTG CGGCATGAGT TCGACACTGC CGATGCCCCC
TTCTTTGCCC CCGGTTCGCA GGGTGCGGCC ATCCACGCCA AGGTCGAGCC ATTGCCGGGC
GAGCCGGTGG TGCTCAAGCA CAAGGTCAAC GCCTTTCTCG GTACCGATCT TGAGCACACG
CTGGACCGGC ATGGCGTCGA GGCGCTGACC ATCGTCGGCA GCATGAGCCA CATGTGCATT
GACGCCGCCA CCCGGGCTGC AGCCGATCTG GGCTATCAAG TGACTGTGGC GCACGATGCC
TGCGCGACCC TGCCACTGGC GTTCGACGGC AAGCAGGTGC CGGCGGCTCA TGTGCATGAT
TCGGCGATGG CGGCGTTGGC GTTTGCCTAT GCCAATGTGG TGAAGACCGA CGAGCTGCTG
AAAAGCTGA
 
Protein sequence
MSKQALIIID IQNDYFPGGK WPLDGVDQAA DNAARLLAAA RQRGDLVVHV RHEFDTADAP 
FFAPGSQGAA IHAKVEPLPG EPVVLKHKVN AFLGTDLEHT LDRHGVEALT IVGSMSHMCI
DAATRAAADL GYQVTVAHDA CATLPLAFDG KQVPAAHVHD SAMAALAFAY ANVVKTDELL
KS