Gene PP_2231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2231 
Symbol 
ID1045104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2539186 
End bp2540262 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content63% 
IMG OID637145645 
Producthypothetical protein 
Protein accessionNP_744380 
Protein GI26988955 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAGC ACCGATGCCC GGTGCGAAGA ATCCTTGTGC ACTATATTGC TCACTGGTCA 
AGATTGCGCA GTATACTGCC CACTTTTGCG GCGATTGTGC GCCGCCCTTT CCGAGTGTGC
AAGACCATGA ACCAGCCCAG CAGCAAGCCT ACCCCTGCCG TCACCTTCCG CCTGAGCAAG
GCCGAACTGG TGCTGGTATT CATCACCATG TTGTGGGGCG GCACTTTCCT GTTGGTGCAT
AACGTGATGA CCGTCAGCGG CCCGATGTTC TTCGTCGGCC TGCGTTTTGC GGCAGCCGCG
CTGTTCGTTG GTGTGGTCTC GGCGCGAGCG CTGCCCGGCC TGACCTTCAC CGAACTGAAG
GCCGGCATGC TGATCGGCGT GTCGATCATG CTCGGCTATG GCCTGCAGAC CATGGGCCTG
CAAACCATCA GCAGCAGCCA GTCAGCGTTC ATCACTGCGC TGTACGTCCC GTTCGTGCCG
CTGCTGCAGT GGCTGGTGCT GGGGCGGCGG CCTGGCCTGA TGCCCAGCAT GGGTATCTGC
CTGGCATTCA TCGGCCTGAT GCTGCTGGCC GGGCCGGAAG GCGGCAGCCT GCGTTTCAGC
GAGGGCGAAC TGGTCACCCT GATCAGCGCC GTGGCCATCG CCGGTGAAAT CATTCTGATC
AGCCGCTACG CCGGTCAGGT CGATGTGCGC CGGGTTACTG TGGTGCAACT GGCGACTGCA
TCGCTGCTGG CGTTCCTGAT GATCGTGCCG ACCCAGGAGC GCATCCCCGA CTTCTCCTGG
CTGTTGCTGG CCAGTGCAGT GGGCCTGGGC GCAATGAGTG CAGTGATCCA GGTGGCAATG
AACTGGGCAC AGAAGTCGGT CTCGCCTACC CGCGCCACAC TCATTTATGC CGGTGAACCG
GTGTGGGCCG GCATCGTCGG GCGTCTGGCT GGCGAGCGCC TGCCTGGCGT GGCGCTGCTC
GGCGGCCTGC TGATCGTGGT CGCCGTGGTG GTCAGTGAAC TCAAGGTGCG GCGCCCTCGC
GAAACTGTCG AAACACGCGA TGTGCAGAAC CCGGGCGAAC GCCAGGCGGG GCTGTAA
 
Protein sequence
MLQHRCPVRR ILVHYIAHWS RLRSILPTFA AIVRRPFRVC KTMNQPSSKP TPAVTFRLSK 
AELVLVFITM LWGGTFLLVH NVMTVSGPMF FVGLRFAAAA LFVGVVSARA LPGLTFTELK
AGMLIGVSIM LGYGLQTMGL QTISSSQSAF ITALYVPFVP LLQWLVLGRR PGLMPSMGIC
LAFIGLMLLA GPEGGSLRFS EGELVTLISA VAIAGEIILI SRYAGQVDVR RVTVVQLATA
SLLAFLMIVP TQERIPDFSW LLLASAVGLG AMSAVIQVAM NWAQKSVSPT RATLIYAGEP
VWAGIVGRLA GERLPGVALL GGLLIVVAVV VSELKVRRPR ETVETRDVQN PGERQAGL