Gene PP_2211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2211 
Symbol 
ID1045074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2517578 
End bp2518600 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content63% 
IMG OID637145625 
ProductAraC family transcriptional regulator 
Protein accessionNP_744360 
Protein GI26988935 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA AAGACACCAT TTCCATGCAG CTGGTGCGCG AAGCGCTGTT GCAGACCTGC 
CCTGCCGGTG AGCCTGACAG TGGCTTGCTG GCCAGGGCGG GCATCGCCGT TGAACAACTG
CACCTGCCAG AGGCAAGGGT CAGTGCCGAG TCCTATGCCC GCCTGTGGCG CTTGCTGGCC
CGGCGCTGCA ACGACGAATT CTTCGCGATG GACACGCGCG GTCTGTGCAG TGGCAGCCTG
GCGTTCATGT GCCGTGCCAG CATGGGCCAG CCGACACTGG GCGCAGGCCT GGAAACCTCG
CTGGCCTTTC TGTCGCTGAT GCTTCAAGAC ATGCAGCCCA GCCTGGTGCG CCAGCAAGGC
CTGGCCGAAA TTGTCATTAA TGAGCCGCGT GACGAACCGC GCCGCGCGTT CACCTATTTC
ACCTTCTGGA TGATCGTGCA TGGGGTGACC TGCTGGCTGG CCGGGCGGCG CATCCCGATT
CTGAGCATTG ATCTGCGTTG TGCCGAACCA CCCTTTTGCG ACGACTATCG GGTCATGTTT
TCGGAGAACC TGCATTTTGA GCGTCCACGC ACACGCATGA TCATTGCTTC GCAATACCTC
GACTTGCCCC TGCGGCGCAG CGAGGAGGAG CTGCAGCGTT TTCTGGCCGA AGCGCCGGGC
AATATCCTGG TCAAGTACCG TGACCCGGCC AGCCTCGGGC GGCGTATCCG CACCGACCTG
TTGCGCCTGG CCCCTGAGCA ATGGCCCGAT GCTGACCGCC TGGCTCGGCA GCTGTGCCTG
TCGCCATCGA CCCTGCGTCG GCGCCTGGCA GAAGAGGGGC AGAACTACCA GGGCTTGAAG
GACAGCGTAC GACGGGAGCT GGCGATCGCC TGGCTCAGCC AGGAAGACGT GGCCATGGGC
GAGCTTGCCG AGCGTTTGGG GTTCGCCGAC AGCAGCTCGT TCTATAAGGC ATTTCGCAAG
TGGTTCGGCT GCAACCCGGG ACATTATCGG GCATTGATCC AGGCGCGAGG GGCAGGGCAC
TGA
 
Protein sequence
MSDKDTISMQ LVREALLQTC PAGEPDSGLL ARAGIAVEQL HLPEARVSAE SYARLWRLLA 
RRCNDEFFAM DTRGLCSGSL AFMCRASMGQ PTLGAGLETS LAFLSLMLQD MQPSLVRQQG
LAEIVINEPR DEPRRAFTYF TFWMIVHGVT CWLAGRRIPI LSIDLRCAEP PFCDDYRVMF
SENLHFERPR TRMIIASQYL DLPLRRSEEE LQRFLAEAPG NILVKYRDPA SLGRRIRTDL
LRLAPEQWPD ADRLARQLCL SPSTLRRRLA EEGQNYQGLK DSVRRELAIA WLSQEDVAMG
ELAERLGFAD SSSFYKAFRK WFGCNPGHYR ALIQARGAGH