| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2205 |
|---|
| Symbol | |
|---|
| ID | 1045068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2510003 |
|---|
| End bp | 2511727 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637145619 |
|---|
| Product | CopA family copper resistance protein |
|---|
| Protein accession | NP_744354 |
|---|
| Protein GI | 26988929 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2132] Putative multicopper oxidases |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGCA ACCCCTCCCG CCGTACGTTT GTCAAAGGCC TGGGCGCCGC CAGCACGCTG
GCGGGCCTGG GTCTGTGGCG CCCGCTGGTC CAGGCCGCTG AAGGCCGAGA CCTGGCCGGC
CAGCATTTCG AGCTGTTCAT TGGCCAGACT CCGGTCAACA TCACAGGCCG ACCGCGTACC
GCACTGACCG TCAACAACAG CCTGCCCGGC CCACTGCTGC GCTGGCGCGA AGGTGACACC
GTGACGTTGC GCGTGCGCAA CCGACTGGCG CAGGACACCT CGATCCACTG GCACGGCATC
ATCCTGCCGG CCAACATGGA CGGCGTGCCT GGCCTGAGCT TCGCTGGCAT CGAGCCCGGC
GGCGACTACC TGTACCAGTT CACCCTGCGC CAGAGCGGCA CCTACTGGTA CCACAGCCAT
TCGGGGCTAC AGGAGCAAGC CGGGGTATAC GGGGCGATCG TGATCGAGCC ACGCGAGCCC
GAAACGCACC GCTACCAGCG CGACCATGTG CTGCTGTTCA GCGACTGGTC AGACCAGGCA
CCGGAACACC TGATGGCGAC GCTGAAGACG CAGTCCGACG CGTACAACTT CCACAAGCGC
ACGGTTGGCG ACTTCATCGA TGACGTGGCC GAAAACGGCT GGAGCGCCAC CGTCGCCGAA
CGCACGGCCT GGGCGCGCAT GCGCATGAGC CCAACCGACC TCGCCGATAT CAGCGCCGCC
ACCTACACCT ACCTGCTCAA CGGCCAACCA CCACAAGGCA ACTTCACCTG CCTGTTCCAG
CCAGGCGAAA CCGTGCGCCT GCGGCTGATC AATGCCTCAG CCATGACCTA CTTCGACTTC
CGCATCCCCG GGCTGAAGCT GACGGTGATC GCCGCCGACG GCTTGCCGGT AACCCCTGTG
AGCGTGGATG AACTGCGCAT TGCCGTGGCA GAGACCTACG ACGTGCTGGT GACCGTGGGT
GACCAACCCG CCTACACCCT GTTCGCCCAG AGCATGGACC GCACCGGCTT TGCCCGCGGT
ACCCTGGCCC GTGCGGCCGG GCTGCAGGCG CCGGTGCCTG CCCCCGACCC GCGCCCGGTG
CTGAGCATGG AAGACATGGG CCACGGCGGC ATGGATGCCA TGGCGGGCAT GGACCACAGA
AATCCGCAGG GCATGAACCA CGGCAGCATG GCCGGTATGG ACCACGCCGC CATGTCGGCC
ATGCAGCAAC ACCCGATCAG TGAAACCGAC AACCCGCTGG TGGACATGCA GACCATGGCA
CCGCGCCCCA ACCTGGCCGA TCCTGGCATA GGCCTGCGTG ACAATGGTCG CCGCGTGCTG
ACCTACGCCG ACCTGCGCAG CCCCTACCCC GACCCGGACG GTCGCCCGCC ATCGCGTGAC
ATCGAGCTGC ACCTGACCGG CCATATGGAG CGCTTCGCCT GGTCGTTCGA CGGCATCAAG
TTCAGCGACG CCGAACCGCT GCGGCTGACC TACGGTGAGC GCGTGCGCAT CACCCTGGTC
AACGACACCA TGATGACCCA CCCCATCCAC CTGCACGGCA TGTGGAGCGA CCTGGAAGAC
GAGCATGGCC AGTTCCTGGT GCGCAAGCAC ACCGTCGATA TCCCGCCCGG CAGCCGACGC
ACCTACCGGG TGACCGCCGA CGCGCTGGGC CGCTGGGCCT ACCACTGCCA CTTGCTCTAC
CACATGGAGA CCGGCATGCT CCGCGAGGTA CGCGTCGATG AATGA
|
|---|
| Protein sequence | MLRNPSRRTF VKGLGAASTL AGLGLWRPLV QAAEGRDLAG QHFELFIGQT PVNITGRPRT
ALTVNNSLPG PLLRWREGDT VTLRVRNRLA QDTSIHWHGI ILPANMDGVP GLSFAGIEPG
GDYLYQFTLR QSGTYWYHSH SGLQEQAGVY GAIVIEPREP ETHRYQRDHV LLFSDWSDQA
PEHLMATLKT QSDAYNFHKR TVGDFIDDVA ENGWSATVAE RTAWARMRMS PTDLADISAA
TYTYLLNGQP PQGNFTCLFQ PGETVRLRLI NASAMTYFDF RIPGLKLTVI AADGLPVTPV
SVDELRIAVA ETYDVLVTVG DQPAYTLFAQ SMDRTGFARG TLARAAGLQA PVPAPDPRPV
LSMEDMGHGG MDAMAGMDHR NPQGMNHGSM AGMDHAAMSA MQQHPISETD NPLVDMQTMA
PRPNLADPGI GLRDNGRRVL TYADLRSPYP DPDGRPPSRD IELHLTGHME RFAWSFDGIK
FSDAEPLRLT YGERVRITLV NDTMMTHPIH LHGMWSDLED EHGQFLVRKH TVDIPPGSRR
TYRVTADALG RWAYHCHLLY HMETGMLREV RVDE
|
|---|
| |