Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2192 |
Symbol | |
ID | 1045054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2496772 |
End bp | 2497896 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637145606 |
Product | ECF subfamily RNA polymerase sigma factor |
Protein accession | NP_744341 |
Protein GI | 26988916 |
COG category | [K] Transcription [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACTT CACCCATGTC GGGCCTGCTG GCAAGTTTCC AGGAGCACTA CGACGACCTG CTGCAGTTTC TGACACGGCG CATGAGTGAC CGCCAGCGCG CGGCCGATGT GGCGCAGGAA ACCTACCTGA AGCTGGTGAA CATCGACGAG CAGGCGGTGC CGGTGTTGCA CGCGCGCAGT TTCATCTTCC GCGTCGCCGG CAACCTGGCG ATTGACGCTT TGCGCCGTGA GCAACGCATC GCCGCCAGCC ACGACGACAG CGACGGAGCC TGTGAGGTGG CCTGCCCGGC GCCTGCACCC GAGGCGGCGT TGCTGGCCCG CGAGCGTTTG CAGATTCTTG ACCAGGCGCT GCTGCAGTTG CCCGACAATG CCCGCCAGGC GCTGTTGCTC AACCGTGTCG AGGGCCTGAC CCAGAAGCAG GTCGCTCAAC GCCTGGGGGT TTCCGAGAGC ATGGTGGCAA AGTATATCGG CCAGGCCTTG CGCCATTGCC GCGGCCGGCT GAAGCAGGCG GGTGTGGCGG CTTCGGTGGT GTTGCTGGTC GCCGCTGTGG CGGGTTGGCA GCAAGCCCCG ATACTGCTGG CCGATTACCA CACCGCCGTG GGCGAGCGGC AGGTCATTAC CCTGACAGAT GGCACACGGG TGACGCTGAA CAGCGCCAGT GCCTTGAGCG TGGCGTTCAG CGAGCATGAA CGGCGTGTGG TACTCGATGC GGGTGAGGCG TTGTTCGAGA CCGCCGATGA TTCACGTCCG TTTGTGGTCG AAACGGCCGG TGCGCGGGTG CAGGGCAATG CTGCCACCTT CAGCGTGCAG CGCGATGGCC ACGTCGTGTT GGCTCGCGGT GAAGCCAAGG TGGGTGAACA TGAACTGGCA GTGGCGGCCG ATGCCGGCAC GCAGATGGCC TGGCAGCGTG GCAAGCTGAT CTTCAACGGC AAGCCGCTGG GGCAGGTGCT GACCGAGCTT GAGCGATACC GGCATGGGCG CATTGTGTTG TCCGACAGCA AGCTGGCTGC GATGGAAGTG AGCGGGGTGT TTGACCTGGA TGAACCTGAG GCCCTGTTGC GGACGTTGGA GCAGCGGTAT GGCCTGAAGG TGACTTACCT GCCGTGGTTG GCCGTGGTGC ATTGA
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Protein sequence | MLTSPMSGLL ASFQEHYDDL LQFLTRRMSD RQRAADVAQE TYLKLVNIDE QAVPVLHARS FIFRVAGNLA IDALRREQRI AASHDDSDGA CEVACPAPAP EAALLARERL QILDQALLQL PDNARQALLL NRVEGLTQKQ VAQRLGVSES MVAKYIGQAL RHCRGRLKQA GVAASVVLLV AAVAGWQQAP ILLADYHTAV GERQVITLTD GTRVTLNSAS ALSVAFSEHE RRVVLDAGEA LFETADDSRP FVVETAGARV QGNAATFSVQ RDGHVVLARG EAKVGEHELA VAADAGTQMA WQRGKLIFNG KPLGQVLTEL ERYRHGRIVL SDSKLAAMEV SGVFDLDEPE ALLRTLEQRY GLKVTYLPWL AVVH
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