| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2171 |
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| Symbol | |
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| ID | 1045031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2477207 |
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| End bp | 2477833 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637145585 |
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| Product | amino acid transporter LysE |
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| Protein accession | NP_744320 |
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| Protein GI | 26988895 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.228082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTCCCA TGAACGTGTG GTTCGCCTAT ACCGCCGCCT GCGTGCTGTT GGTGCTGGCA
CCGGGCCCTG ACAACGTGTT GGCCATTGGC CGCGGTCTCA GCCAGGGTAA AGTCGCAGCG
GCTGTATCCG GCATGGCGTC AGGCGCAGGC ATTCTGTTTC ACGTTGCAGC CGCTTCGTTA
GGCTTGACCC TACTGATGCA AACCTCGGTG CTCGCATTTT GGGTGATCAA GCTCATGGGT
GCCGGCTATC TGCTCTGGCT AGGGATCAAG GTGCTGCGCG CTCGTAACCT CATAAGCTTT
CAGCCGGCCT CCAGGCAATC GCTGCCCAGC ATTTTTCTGA CCGGTCTGCT TTCGGCTGCG
CTCAACCCCA AGCCCGGTTT GTTCGTGCTG GCGTTCATTC CCCAGTTCGT CGACCCCGCA
CGCGGGTCGG TCAGCGTGCA GATGTTGGTT TACGGCGTGT GGTTCGCTGT ACTCACGGCA
TTGGGGTTTG CCTTGATGGG CATTTTCGCC ACGGGACTGT CTCGCTACCT GTACCGGCGG
CCACGGCTGG TGAATGGGCT GAACGTGGGC GCAGGCCTCA CCTTCGTTGC CTCTGGCGTC
TCGATTGCGA CGTTGAGCCA GAGATAG
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| Protein sequence | MFPMNVWFAY TAACVLLVLA PGPDNVLAIG RGLSQGKVAA AVSGMASGAG ILFHVAAASL
GLTLLMQTSV LAFWVIKLMG AGYLLWLGIK VLRARNLISF QPASRQSLPS IFLTGLLSAA
LNPKPGLFVL AFIPQFVDPA RGSVSVQMLV YGVWFAVLTA LGFALMGIFA TGLSRYLYRR
PRLVNGLNVG AGLTFVASGV SIATLSQR
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