Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2170 |
Symbol | |
ID | 1045030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2476463 |
End bp | 2477161 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637145584 |
Product | chorismate mutase family protein |
Protein accession | NP_744319 |
Protein GI | 26988894 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1605] Chorismate mutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.23691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGA TCAGAGCAAG GAAAAAGGCC GATTCGACGG TTAGCTATAC CGTCCAGATC CGCCTCAAGA AAAAGGGTGT CCTAGTCTAC CAAAGGTCCC AGACATTCGC CCGCCAGCAG GCGGCCCAAG CCTGGGCGAC AGATGGTTGG CGTGGCGGAT CTGCATTTTC GCGATCTGCG CCACGAAGGT GTGAGCAGGT TATTCGAAAT GGACTGGGTA TCCTGCGTGT ATCAAGGGTT TCAGGTCATC GTGACGGGCA CTCGCTGCGG CGTTATACCC CCTCGGTAGA GCGTGAAGCG GACCTGGCAC AGAAGCTACA CTGCACGCCC CGATCACCCA CGACAGCCTG CTCCAATCAA TCGCAGGCTC ATGAAAAGGA AGTCATGCAA ATGGATGTAC CTTGCACCTC TCTGGACGAA GTCCGTCAAC GGATCGATGA AATCGACCGC AGCCTCGTTT CGCTTCTCGC CAAACGTGGA AGGCTCGTGA CGCAAGCAGC GGGCTTCAAG AAAACCACCG ATGATGTGCG TGCGCCTGCT CGGGTCGAGC AAGTGATCAA GAAGGCTCGT GAGATGGCTG ACGAAACCGG TGCCTCGGCT GAGGTGGTGG AACAGGTCTA TCGGGCGATG ATTTCGGCCT TCATCGCCGA GGAGCTCAAC ACCCATGCGA AGCTGGCCGA TGAGGCTTCA GCATCGTGA
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Protein sequence | MATIRARKKA DSTVSYTVQI RLKKKGVLVY QRSQTFARQQ AAQAWATDGW RGGSAFSRSA PRRCEQVIRN GLGILRVSRV SGHRDGHSLR RYTPSVEREA DLAQKLHCTP RSPTTACSNQ SQAHEKEVMQ MDVPCTSLDE VRQRIDEIDR SLVSLLAKRG RLVTQAAGFK KTTDDVRAPA RVEQVIKKAR EMADETGASA EVVEQVYRAM ISAFIAEELN THAKLADEAS AS
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