| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2167 |
|---|
| Symbol | |
|---|
| ID | 1045027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2472242 |
|---|
| End bp | 2474092 |
|---|
| Gene Length | 1851 bp |
|---|
| Protein Length | 616 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637145581 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_744316 |
|---|
| Protein GI | 26988891 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.438661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCCC CTAACCCGTT GCCCCTCGTT CTCGCCGGCC CGGTACTGCG CCGCCTGGAA
CCCCAGCGTC TGGCCGTCTG GCTCGTCACT ACCCAACCGC TGCAGCCCGC GTTCGCCTGC
CTGGCAAGCG AGGCCCAAGT CGATTGCCAA GTGGTGCCGA TTGGCCGGCA TGCCTACGTT
CACCTGCTGG ACATCCAATT CGCCAGCCCC CTGCCCTGCA ACCAGCTGCT CGACTACGAC
CTACTGATCA ACGGCCAGGG TATCGCCGAC TGGGCCCCAC ACCTGCTCTA CCCCGGCAAC
CCACGCCCGA GCCTGGTGCT GCGTGAGCGC CTCGACCATT TGCTGCACGG TTCCTGCCGC
AAGCCGCACC ACCCTGCTGC CGACGGCCTG CTGTGCGCCG ACCGGCTGCT GCAGGGGTGC
AAGAAGCCCG AAGACCGCCC CGCCGTGCTA GTGATGACGG GCGACCAGGT TTACGCCGAC
GATGTCGCCG GCCCCATGCT GCGCGCCATC CATAGCCTGA TCTCGCGCCT GGGCTTGTTC
GACGAGCAAC TGGAAGGTGC GGTGGTAGCC GACAGCCAGG CGCTGTACCA GCACCCGGCC
AGCTACTACC ACCGCGCCGA CCTGCTGCCG GCGCTGGAAC GCAACGACAC CCTGCGCGAG
CGTTTTTTCG GCGGCAAGCG CAAGCCGATC TTCTCGTCCA GCAACGCCGA CAACCACCTG
GTGACCTTCG CCGAAGTCAT GGCCATGTAC CTGTTGGTGT GGTCGCCGGT GCCCTGGCAG
CTGGTGGACC TGGGAATCCC CAGCGGGCTC AGCGACGAGC ATCAAGCCCG ATACCAGCAA
GAGCTGCCGC TGATCCAGGG GTTTGCCGAC AATCTCGGTC AGGTGGCGCG GGTGATGGCC
CACCTGCCCT GCCTGATGAT CTTCGATGAC CACGACATCA CGGACGACTG GAACCTCTCG
GCGCAGTGGG AGGAAACGGC CTACGGCCAC CCATTCTCGC GAAGGATCAT CGGCAACGCC
TTGCTCGGCT ACCTGCTCTG CCAGGCCTGG GGCAACAGCC CGGACGACTG CAATCCGCTG
ATCAAGCAGT GCCAGGTGCT GACCCGCCAG AACCAGGATG AGCTGATCGG CGAACTGTTG
CGCTTCCAGG GCTGGCAGTT CAGCCTGCCT ACAGAACCAC CGCTGCTGGT ATTGGACACC
CGCACCCGCC GCTGGCGCAG CGAAAGCAAC CTGGCCAAGC CGTCCGGCCT GCTGGACTGG
GAAGCGCTGA GTGAATTGCA GCAAGCACTG CTCGATCATC CTTCGGCGGT CATCGTGTCA
CCTGCGCCGA TTTTCGGGGT GAAGCTAATC GAGACAGTGC AGAAGGTGTT CAGCTGGCTG
GGCTACCCGC TGCTGGTGGA TGCCGAGAAC TGGATGGCCC ACCGCGGTGC AGCGCAGGTC
ATCCTCAATA TCTTCCGCCA CTCGCGCACG CCGGGGCACT ACGTGGTGCT GTCGGGGGAT
GTGCATTATT CATTCGTGTA TGAGGTGCTG ATTCGCCACC GCCAACGCAG CCCGCACTTG
TGGCAGGTGA CCAGCAGCGG AATCAAGAAC GAGTTCCCCC GGCGCTTGCT GGATGTGCTC
GACCGGCTCA ACCGCTGGTT GTATGCACCG CGCTCGCCGC TCAACTGGTT TACCAAGCGC
CGAGAAATGG AGGTGGTGCC GCGTACGCCC AGCCACAGCA AGGCCGGGGA ACGGCTGTGG
AATGGTGCCG GGCTGGGACA GGTGTTTTTT GATGAACAGG GGCGGCCGGC GCGGGTGTAC
CAGCTGGATG CTGGCGGGGG TGAGGCTACA GAGTTTAAAA ACCGGGCGTA G
|
|---|
| Protein sequence | MTSPNPLPLV LAGPVLRRLE PQRLAVWLVT TQPLQPAFAC LASEAQVDCQ VVPIGRHAYV
HLLDIQFASP LPCNQLLDYD LLINGQGIAD WAPHLLYPGN PRPSLVLRER LDHLLHGSCR
KPHHPAADGL LCADRLLQGC KKPEDRPAVL VMTGDQVYAD DVAGPMLRAI HSLISRLGLF
DEQLEGAVVA DSQALYQHPA SYYHRADLLP ALERNDTLRE RFFGGKRKPI FSSSNADNHL
VTFAEVMAMY LLVWSPVPWQ LVDLGIPSGL SDEHQARYQQ ELPLIQGFAD NLGQVARVMA
HLPCLMIFDD HDITDDWNLS AQWEETAYGH PFSRRIIGNA LLGYLLCQAW GNSPDDCNPL
IKQCQVLTRQ NQDELIGELL RFQGWQFSLP TEPPLLVLDT RTRRWRSESN LAKPSGLLDW
EALSELQQAL LDHPSAVIVS PAPIFGVKLI ETVQKVFSWL GYPLLVDAEN WMAHRGAAQV
ILNIFRHSRT PGHYVVLSGD VHYSFVYEVL IRHRQRSPHL WQVTSSGIKN EFPRRLLDVL
DRLNRWLYAP RSPLNWFTKR REMEVVPRTP SHSKAGERLW NGAGLGQVFF DEQGRPARVY
QLDAGGGEAT EFKNRA
|
|---|
| |