| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2156 |
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| Symbol | lolE |
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| ID | 1045014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2463001 |
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| End bp | 2464242 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637145570 |
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| Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
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| Protein accession | NP_744305 |
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| Protein GI | 26988880 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.775226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0206091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGAC CCTTGCCCAT CTTTATCGGC GCGCGCTACA CCCGAGCCAA GCGTCGCAAC
CACTTCATCT CGTTCATTTC GATGACTTCG ATGATCGGCC TGTCGCTGGG CGTGCTGGCA
ATGATCGTGG TGCTGTCGGT AATGAACGGC TTCCAGCGCG AAATGAGCTC GCGCATTCTC
GGCCTGGTGC CGCATGCCGC CATCCTGGGC GTGCAGCCGG TGGACGACTG GCACAAGGTG
GCCGACGCAG CCATGAAGAA TCCGGCGGTG ATGGCGGTGG CGCCGATTAC CGAGATGGAA
GGCATGCTGT CGTACAAGGG CGCCATGCAG CCGATCCAGG TGGGTGGTAT CGACCCGGCC
GAGGAGGGCA AGGTTTCCAT CGTTGGCCAG CACATCGTCC AGGGCCGCCT GCAGGGCTTG
CAGCCCGGTG AATTCGGCGT GGTCATCGGC GAGCTGACCG CACGCCGCTT CCGCCTGAAT
ACCGGCGACA AGCTGACCTT GATCGTGCCG GAAATCAGCA AGGAACCGGG TGGTATCACC
CCGCGCATGC AGCGCCTCAC CGTGGTCGGC ATCTTCAAGG TTGGCGCCGA GCTGGATGGG
TCGCAGGCTT ATATCCATGT TGCTGATGCA GCCGAGATGC AGCGCTGGGC GCCAGGCCAG
GTGCAAGGTG TGCGCCTGAA GCTGCACGAC CTGTATGCCG CTCCGCAGGT GTCCAAGGCG
ATTGCTGCCG GGCTTGGGGA CGCCTACCGG GCCGATGACT GGTCGCATAC CCAGGGCAGC
CTGTTCAGCG CCATGAAGAT GGAAAAGACC ATGATCGGCC TGTTGCTGAT GATGATCATC
GCGGTAGCGG CGTTCAATAT CATCGCCACC CTGGTGATGG TGGTGAACGA CAAGGGGCCG
GACATTGCCA TCCTGCGTAC CTTGGGCGCC ACGCCGGCGC AGATCATGGG TACGTTCATG
GTCCAGGGCA GCCTGATCGG CATTGTCGGC ACGCTGATTG GTGGTGTACT GGGCGTGATT
GCGGCGTTCA ATGTCAGCCA GATCGTCGGC TGGCTGGAGC GGGTGAGCGG GCAACACATC
TTTACGTCGG ATGTGTACTT CGTCAGCAGC TTGCCGTCGC AGTTGCAGTG GGGGGATGTG
GCGATCATCT GCACCGCCGG CCTGGTGATG AGTTTCCTGG CGACCATTTA CCCGGCCTAC
CGGGCGTCGC AGGTGCAGCC GGCGATTGGC CTGGCGGTTT GA
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| Protein sequence | MFRPLPIFIG ARYTRAKRRN HFISFISMTS MIGLSLGVLA MIVVLSVMNG FQREMSSRIL
GLVPHAAILG VQPVDDWHKV ADAAMKNPAV MAVAPITEME GMLSYKGAMQ PIQVGGIDPA
EEGKVSIVGQ HIVQGRLQGL QPGEFGVVIG ELTARRFRLN TGDKLTLIVP EISKEPGGIT
PRMQRLTVVG IFKVGAELDG SQAYIHVADA AEMQRWAPGQ VQGVRLKLHD LYAAPQVSKA
IAAGLGDAYR ADDWSHTQGS LFSAMKMEKT MIGLLLMMII AVAAFNIIAT LVMVVNDKGP
DIAILRTLGA TPAQIMGTFM VQGSLIGIVG TLIGGVLGVI AAFNVSQIVG WLERVSGQHI
FTSDVYFVSS LPSQLQWGDV AIICTAGLVM SFLATIYPAY RASQVQPAIG LAV
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