Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2155 |
Symbol | lolD |
ID | 1045012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2462242 |
End bp | 2462940 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637145569 |
Product | lipoprotein releasing system, ATP-binding protein |
Protein accession | NP_744304 |
Protein GI | 26988879 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.390667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.080358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAGT CGCGCATGAG TGATAAAGCC GTTCTGAGTT GCCGCAACCT GGGCAAGTCC TACGACGAGG GCCCGGAGTC GGTGCAGGTG CTGTCCGGGC TCAACCTGGA ACTGCGGGCC GGTGAGCGGG TGGCCATCGT TGGCAGTTCC GGCTCGGGCA AGAGTACCTT GCTCAACCTG CTGGGCGGCC TCGACCGGCC GACCCAGGGC AGCGTGTGGC TGGCTGGCGA AGAGCTGTCG GCACTGGGCG AGCGTGCCCG TGGCCTGCTA CGCAACCGTG AGTTGGGCTT TGTCTACCAG TTCCACCACC TGCTGCCGGA ATTCACCGCC ATCGAGAACG TGTGCATGCC GCTGCTGATC GGCCGAACGC CCATCCCCGA GGCCCGGGAG CGTGCCGAGG CGCTGCTCAA GCGGGTAGGC CTGGGCCACC GCTTGAACCA CAAGCCGGCC GAGCTTTCCG GCGGCGAACG CCAGCGCGTG GCGATTGCCC GGGCGCTGGT CAACCGCCCC GGCCTGGTGA TGCTCGACGA GCCAACCGGT AACCTCGACC ACCATACCGC CCAAGGCATC CAGGAGCTGA TGCAGGAGCT GTCCAGCGCT TCGCGCACGG CATTCCTGGT GGTCACCCAC GACCTCAACC TGGCGCGGCA GATGGACCGT GTGCTGAAGC TCGACGATGG CCACCTGGTG GCCATCTGA
|
Protein sequence | MSESRMSDKA VLSCRNLGKS YDEGPESVQV LSGLNLELRA GERVAIVGSS GSGKSTLLNL LGGLDRPTQG SVWLAGEELS ALGERARGLL RNRELGFVYQ FHHLLPEFTA IENVCMPLLI GRTPIPEARE RAEALLKRVG LGHRLNHKPA ELSGGERQRV AIARALVNRP GLVMLDEPTG NLDHHTAQGI QELMQELSSA SRTAFLVVTH DLNLARQMDR VLKLDDGHLV AI
|
| |