Gene PP_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2155 
SymbollolD 
ID1045012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2462242 
End bp2462940 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content67% 
IMG OID637145569 
Productlipoprotein releasing system, ATP-binding protein 
Protein accessionNP_744304 
Protein GI26988879 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID[TIGR02211] lipoprotein releasing system, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.390667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.080358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGT CGCGCATGAG TGATAAAGCC GTTCTGAGTT GCCGCAACCT GGGCAAGTCC 
TACGACGAGG GCCCGGAGTC GGTGCAGGTG CTGTCCGGGC TCAACCTGGA ACTGCGGGCC
GGTGAGCGGG TGGCCATCGT TGGCAGTTCC GGCTCGGGCA AGAGTACCTT GCTCAACCTG
CTGGGCGGCC TCGACCGGCC GACCCAGGGC AGCGTGTGGC TGGCTGGCGA AGAGCTGTCG
GCACTGGGCG AGCGTGCCCG TGGCCTGCTA CGCAACCGTG AGTTGGGCTT TGTCTACCAG
TTCCACCACC TGCTGCCGGA ATTCACCGCC ATCGAGAACG TGTGCATGCC GCTGCTGATC
GGCCGAACGC CCATCCCCGA GGCCCGGGAG CGTGCCGAGG CGCTGCTCAA GCGGGTAGGC
CTGGGCCACC GCTTGAACCA CAAGCCGGCC GAGCTTTCCG GCGGCGAACG CCAGCGCGTG
GCGATTGCCC GGGCGCTGGT CAACCGCCCC GGCCTGGTGA TGCTCGACGA GCCAACCGGT
AACCTCGACC ACCATACCGC CCAAGGCATC CAGGAGCTGA TGCAGGAGCT GTCCAGCGCT
TCGCGCACGG CATTCCTGGT GGTCACCCAC GACCTCAACC TGGCGCGGCA GATGGACCGT
GTGCTGAAGC TCGACGATGG CCACCTGGTG GCCATCTGA
 
Protein sequence
MSESRMSDKA VLSCRNLGKS YDEGPESVQV LSGLNLELRA GERVAIVGSS GSGKSTLLNL 
LGGLDRPTQG SVWLAGEELS ALGERARGLL RNRELGFVYQ FHHLLPEFTA IENVCMPLLI
GRTPIPEARE RAEALLKRVG LGHRLNHKPA ELSGGERQRV AIARALVNRP GLVMLDEPTG
NLDHHTAQGI QELMQELSSA SRTAFLVVTH DLNLARQMDR VLKLDDGHLV AI