Gene PP_2153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2153 
Symbol 
ID1045010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2460321 
End bp2460905 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content62% 
IMG OID637145567 
Producttype IV pilus assembly PilZ 
Protein accessionNP_744302 
Protein GI26988877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00727048 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGACAT TAGACGAAGA AGATCGCCGC GAATACTACC GCATCGAAGA TCGGATCGCA 
CTTCAAATAA GCCCCCTTAG CGCGGCCGAA GCCCTTGAAC CAGATGTGTT GCAAGATGAT
TCGCCGCTGT TCAACCTGCT CAGCGAGCTG CACCTGGCCG ACTTCGAGTC GCAACACCTG
TTGCGCCAGT TAAGCGACAA GGACCGCACC CTCGCCGCCT TCCTGCGGGC ACAGAACAAG
CGCCTCGACT TGCTCAGCGC GGTGGTTGGG CAAACCCTGC TTGGCGAAGT CGGCGAGCCG
CTGCCGGTGG TCATTTCCGA AGGCGGCATC GAATCCGTCC ACGCCACACA GATTGCCCCC
GGTACCCGGG TGAAAGTGAA AATGGTGCTG ATGCCGCGCG CCCACGGCCT GCTGCTGCGC
GGCAAGGTCA CCCATTGCGA CCCTCGCCCG GAGGGCGGCT TCGAGGTCGG TACCGAGTTC
ATCGACATGA CCGACGCCCA ACGACAACTG CTGGCCCGAT ACATCCTGCA GCGCCAGCAA
CAACAACGGC GCCAGCAGCT GGAACTGAAC GACCCCGCCT CCTGA
 
Protein sequence
MTTLDEEDRR EYYRIEDRIA LQISPLSAAE ALEPDVLQDD SPLFNLLSEL HLADFESQHL 
LRQLSDKDRT LAAFLRAQNK RLDLLSAVVG QTLLGEVGEP LPVVISEGGI ESVHATQIAP
GTRVKVKMVL MPRAHGLLLR GKVTHCDPRP EGGFEVGTEF IDMTDAQRQL LARYILQRQQ
QQRRQQLELN DPAS