Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2153 |
Symbol | |
ID | 1045010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2460321 |
End bp | 2460905 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637145567 |
Product | type IV pilus assembly PilZ |
Protein accession | NP_744302 |
Protein GI | 26988877 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00727048 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACGACAT TAGACGAAGA AGATCGCCGC GAATACTACC GCATCGAAGA TCGGATCGCA CTTCAAATAA GCCCCCTTAG CGCGGCCGAA GCCCTTGAAC CAGATGTGTT GCAAGATGAT TCGCCGCTGT TCAACCTGCT CAGCGAGCTG CACCTGGCCG ACTTCGAGTC GCAACACCTG TTGCGCCAGT TAAGCGACAA GGACCGCACC CTCGCCGCCT TCCTGCGGGC ACAGAACAAG CGCCTCGACT TGCTCAGCGC GGTGGTTGGG CAAACCCTGC TTGGCGAAGT CGGCGAGCCG CTGCCGGTGG TCATTTCCGA AGGCGGCATC GAATCCGTCC ACGCCACACA GATTGCCCCC GGTACCCGGG TGAAAGTGAA AATGGTGCTG ATGCCGCGCG CCCACGGCCT GCTGCTGCGC GGCAAGGTCA CCCATTGCGA CCCTCGCCCG GAGGGCGGCT TCGAGGTCGG TACCGAGTTC ATCGACATGA CCGACGCCCA ACGACAACTG CTGGCCCGAT ACATCCTGCA GCGCCAGCAA CAACAACGGC GCCAGCAGCT GGAACTGAAC GACCCCGCCT CCTGA
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Protein sequence | MTTLDEEDRR EYYRIEDRIA LQISPLSAAE ALEPDVLQDD SPLFNLLSEL HLADFESQHL LRQLSDKDRT LAAFLRAQNK RLDLLSAVVG QTLLGEVGEP LPVVISEGGI ESVHATQIAP GTRVKVKMVL MPRAHGLLLR GKVTHCDPRP EGGFEVGTEF IDMTDAQRQL LARYILQRQQ QQRRQQLELN DPAS
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