Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2151 |
Symbol | sthA |
ID | 1045007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2458130 |
End bp | 2459524 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637145565 |
Product | soluble pyridine nucleotide transhydrogenase |
Protein accession | NP_744300 |
Protein GI | 26988875 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.148708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00883462 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCTGTCT ACAACTACGA CGTAGTGGTG CTGGGTTCCG GCCCGGCCGG TGAAGGCGCG GCAATGAACG CCGCCAAAGC AGGGCGCAAG GTAGCGATGG TCGATGACCG TCGCCAGGTC GGTGGCAACT GCACCCACTT GGGTACCATT CCGTCCAAGG CACTGCGTCA CTCGGTGCGG CAGATCATGC AGTTCAATAC CAACCCGATG TTTCGTGCCA TCGGCGAGCC GCGCTGGTTC TCGTTCCCGG ACGTGCTGAA AAGCGCCGAG AAGGTCATCG CCAAGCAGGT CGCATCGCGC ACCGGCTACT ATGCCCGTAA CCGCGTCGAC GTGTTCGTCG GCACCGGCAG CTTTGCCGAC GAGCAAACCG TGGAAGTGGT GTGCCCGAAT GGCGTGGTCG AGAAGCTCAA CGCCAAGCAC ATCATCATCG CGACCGGCTC GCGCCCCTAC CGCCCGGCCG ACATCGACTT CCACCACCCG CGCGTATACG ACAGCGACAC CATCCTCAGC CTCAGCCATA CCCCGCGCAA GCTGATCGTG TACGGTGCCG GCGTGATCGG TTGCGAATAC GCTTCGATCT TCAGTGGCCT GGGCGTATTG GTCGAGCTGG TCGACAACCG TGGCCAGCTG CTGAGCTTCC TCGATTCGGA AATTTCCCAG GCGCTGAGCT ACCACTTCAG CAACAACAAC ATCACCGTGC GCCACAACGA AGAGTACGAG CGCGTCGAAG GCCTGGACAA CGGGGTGATC CTGCACCTCA AGTCGGGCAA GAAGATCAAG GCCGACGCCT TGCTGTGGTG CAACGGCCGT ACCGGCAACA CTGACAAGCT GGGCCTGGAA AACATCGGCA TCAAGGTGAA CAGCCGTGGC CAGATCGAGG TCGACGAGGC CTACCGTACC ACCGTGCCGA ACATCTACGG TGCCGGCGAC GTGATCGGCT GGCCAAGCCT GGCCAGTGCT GCCCATGACC AGGGCCGGTC GGCCGCTGGC AGCATTGTCG ATAACGGCAG CTGGCGCTTC GTCAACGACG TGCCGACGGG TATCTACACC ATTCCCGAGA TCAGCTCGAT CGGCAAGAAC GAGCAGGAGC TGACCCAGGC CAAGGTGCCG TACGAAGTGG GCAAGGCCTT CTTCAAGAGC ATGGCGCGTG CGCAGATCGC CGGCGAGCCG CAGGGCATGC TGAAGATCCT GTTCCACCGC GAAACCCTGG AAATCCTCGG CGTGCATTGC TTCGGCTACC AGGCTTCGGA AATCGTCCAC ATTGGCCAGG CGATCATGAA CCAGCCAGGT GAGCAGAACA ACCTGAAGTA CTTCGTCAAC ACCACGTTCA ACTACCCGAC CATGGCCGAA GCCTATCGGG TAGCTGCCTA TGACGGCCTG AACCGGCTTT TTTGA
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Protein sequence | MAVYNYDVVV LGSGPAGEGA AMNAAKAGRK VAMVDDRRQV GGNCTHLGTI PSKALRHSVR QIMQFNTNPM FRAIGEPRWF SFPDVLKSAE KVIAKQVASR TGYYARNRVD VFVGTGSFAD EQTVEVVCPN GVVEKLNAKH IIIATGSRPY RPADIDFHHP RVYDSDTILS LSHTPRKLIV YGAGVIGCEY ASIFSGLGVL VELVDNRGQL LSFLDSEISQ ALSYHFSNNN ITVRHNEEYE RVEGLDNGVI LHLKSGKKIK ADALLWCNGR TGNTDKLGLE NIGIKVNSRG QIEVDEAYRT TVPNIYGAGD VIGWPSLASA AHDQGRSAAG SIVDNGSWRF VNDVPTGIYT IPEISSIGKN EQELTQAKVP YEVGKAFFKS MARAQIAGEP QGMLKILFHR ETLEILGVHC FGYQASEIVH IGQAIMNQPG EQNNLKYFVN TTFNYPTMAE AYRVAAYDGL NRLF
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