Gene PP_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2143 
SymbollexA-1 
ID1044998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2444900 
End bp2445508 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content63% 
IMG OID637145557 
ProductLexA repressor 
Protein accessionNP_744292 
Protein GI26988867 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0821224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAC TGACGCCACG CCAAGCCGAA ATTCTCGCGT TCATCAAGCG CTGCCTGGAA 
GACAACGGCT TCCCGCCTAC CCGCGCCGAG ATTGCTCAGG AGCTGGGCTT CAAGTCGCCC
AATGCCGCCG AGGAGCACCT CAAGGCCCTT GCCCGCAAGG GCGCGATCGA AATGACGCCG
GGCGCTTCCC GCGGCATCCG CATCCCTGGC CTGGAAGCCA AGGCTGAAGA AGCCGGCCTG
CCCATCATCG GCCGGGTCGC TGCCGGTGCG CCGATTCTTG CCGAACAGCA CATCGAGCAA
TCCTGCAACA TCAACCCTGC CTTCTTCCAC CCCCAAGCCG ACTATTTGCT GCGCGTACAC
GGCATGAGCA TGAAGGACGT CGGCATCTTC GACGGCGACC TGCTGGCGGT GCACACCTGC
CGTGAAGCCC GCAACGGCCA GATCGTTGTG GCGCGCATCG GTGACGAAGT CACCGTCAAG
CGCTTCAAGC GCGAAGGCAG CAAAGTCTGG CTGCTTGCCG AAAACCCCGA ATTCGCCCCC
ATCGAAGTCG ACCTGAAAGA ACAGGAGCTG GTGATCGAGG GCTTGAGCGT CGGCGTCATT
CGCCGCTGA
 
Protein sequence
MLKLTPRQAE ILAFIKRCLE DNGFPPTRAE IAQELGFKSP NAAEEHLKAL ARKGAIEMTP 
GASRGIRIPG LEAKAEEAGL PIIGRVAAGA PILAEQHIEQ SCNINPAFFH PQADYLLRVH
GMSMKDVGIF DGDLLAVHTC REARNGQIVV ARIGDEVTVK RFKREGSKVW LLAENPEFAP
IEVDLKEQEL VIEGLSVGVI RR