Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2094 |
Symbol | |
ID | 1044946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2385886 |
End bp | 2387100 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637145508 |
Product | nitrate-binding protein NasS, putative |
Protein accession | NP_744244 |
Protein GI | 26988819 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.784638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.17268 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACACTG TACCCCGAGC AACGCCCCTG GCCTGGGTCA ACGGCAGCGA CGCGCCGGAA AAAACCAGCC TGAACATCGG CTATATGGCC CTGACCGACT GCGCCTCGGT CGTGGTCGCC GCCACCCAGG GCTTCGCCCA GCAGCACGGC CTTACCCTCA ACCTCCAGCG CCAGGGCTCG TGGGCCGGGC TGCGCGACAA GCTGGTCAGC GGCGAACTGG ACGCCGCACA TTGCCTGTAT GGCCTGGTCT ACGCCGTGCA CCTGGGCATT GGCGGCGTAC CTGCCAGCGA CATGGCCGTG CTCATGGGGC TGAACCAGAA CGCCCAGGCT ATCAACCTGT CCCCTGCCTT GCAGCGCAAG GGCGTGACCA ACCCTGAGGC ACTGGCGCGC CTGGTGCACC AGCATGGCGC ACGCCTGACG TTCGCCCAGA CCTTCCCCAC CGGCACCCAC GCCATGTGGC TGTATTACTG GCTGGCCAGC CAGGGCATTC ACCCGCTGCG CGACGTCGAC AGCGTAGTGG TGCCACCGGC GCAGATGGCT GCACACCTCC AGGCCGGGCG CATTGACGGC TTCTGCGTTG GTGAGCCCTG GGCCGCCGAC GCGGTGGCCA AAGGCCAAGG CTTCACCCTG GCCACCAGCC AGTCGATCTG GCCGGATCAC CCGGAAAAGG TCCTGGCCTG CGCCCGCGTC TTTGCCGAGC AATACCCCAA CAGCGCCCGT GCGCTGATCA AGGCGATCCT CACCGCCAGC CGATTCATCG AGCAAAGCCC GGAAAACCGC CGCAGCACCG CGCAACTGCT CAGCGCAAGC GCTTACCTGG ACACCCCGCT GGACAGCATA GCCCCCCGCC TGCTCGGCCA TTATGAGGAT GGCCTGGGCA ACCAGTGGCA AGACCCACAC GCCCTGCGCC TGTTCGACCA AGGCCGGGCC AACCTGCCCT ACCTGTCCGA CGGTATGTGG TTCATGACCC AGTTCCGCCG CTGGGGCCTG CTGCGCGAAG ACCCCGACTA CCTCGGCGTG GCCCGGCAGG TCCAGCAACT GCAGTTGTAC AGCGAGGCCG CACAGAGCCT GGGCATCGCT TGCCCAGGCC AACCGATGCG CAGCAGCCTG CTGATCGATG GCTCCCGCTG GGACGGCAGC GACCCCTTCG GCTATGCCCG CAGTTTCAGC TTGCATGCCT TGGGCGAGTT GCCCGATGCC CGTGTCGGCG CGTGA
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Protein sequence | MNTVPRATPL AWVNGSDAPE KTSLNIGYMA LTDCASVVVA ATQGFAQQHG LTLNLQRQGS WAGLRDKLVS GELDAAHCLY GLVYAVHLGI GGVPASDMAV LMGLNQNAQA INLSPALQRK GVTNPEALAR LVHQHGARLT FAQTFPTGTH AMWLYYWLAS QGIHPLRDVD SVVVPPAQMA AHLQAGRIDG FCVGEPWAAD AVAKGQGFTL ATSQSIWPDH PEKVLACARV FAEQYPNSAR ALIKAILTAS RFIEQSPENR RSTAQLLSAS AYLDTPLDSI APRLLGHYED GLGNQWQDPH ALRLFDQGRA NLPYLSDGMW FMTQFRRWGL LREDPDYLGV ARQVQQLQLY SEAAQSLGIA CPGQPMRSSL LIDGSRWDGS DPFGYARSFS LHALGELPDA RVGA
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