Gene PP_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2089 
SymboloprF 
ID1042726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2380334 
End bp2381368 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content59% 
IMG OID637145503 
ProductOmpF family protein 
Protein accessionNP_744239 
Protein GI26988814 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.437855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0407434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA AAAACACCTT GGGCTTGGCC ATTGGTTCGC TTGTAGCCGC CACTTCGATT 
GGCGCTATGG CACAAGGTCA AGGCGCCGTC GAGACTGAAA TCTTCTACAA GAAAGAATTC
TTCGACAGCC AGCGCGACTT CAAGAACGAC GGCAACCTGT TCGGCGGCTC GATCGGTTAC
TTCCTGACCG ACGACGTTGA GCTGCGTCTG GGCTACGACG AAGTGCACAA CGCTCGTGGC
GAAGACGGCA AGAACATCAA GGGCTCGAAC ACTGCCCTGG ACGCCGTTTA CCACTTCAAC
AACCCGTACG ACGCTATCCG TCCATACGTT TCCGCTGGTT TCTCGCACCA GTCGCTGGGC
CAGACCGGCC GTGGCGGTCG TGACCACTCC ACCTTCGCCA ACGTTGGCGC TGGCGCCAAG
TGGTACATCA CCGACATGTT CTATGCCCGT GCCGGCGTAG AAGCTCAGTA CAACATCGAC
CAGGGCGACA CCGAGTGGGC CCCGAGCGTT GGTGTTGGCC TGAACTTCGG CGGTAGCCCG
AAGCAAGCTG AAGCTGCTCC TGCTCCAGTT GCTGAAGTCT GCTCCGACTC CGACAACGAC
GGCGTGTGCG ACAACGTCGA CAAGTGCCCA GACACCCCGG CCAACGTTAC CGTTGACGCC
GACGGCTGCC CGGCTGTTGC CGAAGTCGTT CGCGTTGAGC TGGACGTCAA GTTCGACTTC
GACAAGTCGG TCGTCAAGCC TAACAGCTAC GGCGACATCA AAAACCTGGC TGACTTCATG
AAGCAGTACC CACAAACCAC CACCGTGGTT GAAGGTCACA CTGACTCCGT GGGTCCAGAC
GCTTACAACC AGAAGCTGTC CGAGCGTCGT GCCAACGCTG TCAAGCAAGT GCTGACCCAG
CAGTACGGCG TAGAATCCAG CCGTGTTGAC TCGGTTGGCT ACGGCGAAAC CCGTCCGGTT
GCTGACAACG CCACCGAAGA AGGCCGTGCT GTCAACCGTC GCGTTGAAGC TCAGGTAGAA
GCCCAGGCCA AGTAA
 
Protein sequence
MKLKNTLGLA IGSLVAATSI GAMAQGQGAV ETEIFYKKEF FDSQRDFKND GNLFGGSIGY 
FLTDDVELRL GYDEVHNARG EDGKNIKGSN TALDAVYHFN NPYDAIRPYV SAGFSHQSLG
QTGRGGRDHS TFANVGAGAK WYITDMFYAR AGVEAQYNID QGDTEWAPSV GVGLNFGGSP
KQAEAAPAPV AEVCSDSDND GVCDNVDKCP DTPANVTVDA DGCPAVAEVV RVELDVKFDF
DKSVVKPNSY GDIKNLADFM KQYPQTTTVV EGHTDSVGPD AYNQKLSERR ANAVKQVLTQ
QYGVESSRVD SVGYGETRPV ADNATEEGRA VNRRVEAQVE AQAK