| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2088 |
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| Symbol | sigX |
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| ID | 1042732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2379632 |
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| End bp | 2380222 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637145502 |
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| Product | RNA polymerase sigma factor SigX |
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| Protein accession | NP_744238 |
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| Protein GI | 26988813 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.176045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0352187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAATAAAG TTCATTCGCC GCCCATGCGC TATGACCCCC GCGAGCTCAC AGACGAAGAG
TTGGTGGCGC GTTCGCATGA GGAGCTGTAC CACGTTACCC GCGCCTATGA AGAGCTCATG
CGGCGCTACC AACGGACCCT GTTCAACGTC TGTGCGCGTT ATCTGGGGAA CGACCGTGAC
GCGGACGATG TCTGTCAGGA AGTGATGCTG AAAGTGCTGT ACGGGCTGAA GAACTTCGAG
GGTAAGTCGA AGTTCAAGAC CTGGCTCTAC AGCATCACCT ACAACGAGTG CATTACCCAG
TACCGCAAGG AGCGTCGCAA ACGTCGGTTG ATGGATGCCT TGAGTCTGGA CCCTGTTGAA
GAGGCGTCCG AAGACAAGGC TCCGAAGCCG GAAGAAAAAG GCGGGCTGGA CAAGTGGCTG
GTGCATGTGA ACCCGATTGA CCGGGAAATT CTGGTGCTGC GTTTTGTCGC AGAGCTGGAG
TTCCAGGAAA TTGCCGACAT CATGCACATG GGCCTGAGCG CGACGAAAAT GCGTTACAAG
CGCGCGCTAG ACAAGCTTCG GGAGAAATTT GCCGGCCTTG ATGAAACTTA G
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| Protein sequence | MNKVHSPPMR YDPRELTDEE LVARSHEELY HVTRAYEELM RRYQRTLFNV CARYLGNDRD
ADDVCQEVML KVLYGLKNFE GKSKFKTWLY SITYNECITQ YRKERRKRRL MDALSLDPVE
EASEDKAPKP EEKGGLDKWL VHVNPIDREI LVLRFVAELE FQEIADIMHM GLSATKMRYK
RALDKLREKF AGLDET
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