Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2083 |
Symbol | |
ID | 1042757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2375644 |
End bp | 2376636 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637145497 |
Product | lipase, putative |
Protein accession | NP_744233 |
Protein GI | 26988808 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.826703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0145598 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGCA GCAGCACTTT ATTCCCCGTG GCCCTGCTCA GTGCCGAGCG CCGCGGCGAT CTCAGCGAAG ACGTGTATCG GATCAAGGCC GGCAATGGCC CGGACCCCAG CGTCGAGCTC GCCATCACCC GTCTGGGGCT GGCCGACCAG GCTCAGGCCC AGGGCGTGCC GGTCATTCTC CTGCATGGCA GTTTTTCCAA TCGGCGCTTC TGGTATTCGC CCAAAGGGGT TGGCCTGGGC GCCTACCTTG CACGTGCCGG TTTCGATGTC TGGATCCCGG AAATGCGAGG CCACGGCCTG TCGCCGCGTA ACCATGACTG GAAACACAAC AGCGTTGCCG CCTACGCCCG TGATGACCTG CCGCTGATCA ACGCCTTCGT GCGCGAGCAA TCGGGCCAGG CGCCGCACTG GGTTGGTCAT TCCCTGGGTG GCACCACCCT GGTAGCTGCG CTGGGCGGTG GTTTTCTGGC TGCCGAGCAG TTGGCCAGCG TGGCGCTGTT CGGTACCCAG ATCAGCCGTG TCTATTGGCC GTTGAAAGTG CCGCCGCTGG CTTGGGGCGC GAAGCTGGTG CTCAAGCGTT GGGGGCAGAT ATCCGGGCCA CGTTTCAAGC GTGGGCCTGA AGACGAGCCG ATAGGCCTCG CCCTGGAGAG CATGCGCTGG CACGGCCTGT TCGGGCGCTT TGGCGACAAG CAGAACGATT GGTGGGCAGG GCTGGCTGAA GTGGATGTAC CGCTGCTGGC AGTGGCCGGT GCAGGGGACT TCCAGGACCC GGTGTGGGCC TGTCGCAAGC TGTTCGAGCA GTTGGGCGGC GAGCGCAAGC AGTTCCTGCG GCTGGGTCGT GAAGAAGGTT TCGAGGCCTT TGGGCATGTC GACATGCTGG TGAGCAAGGC TGCGCAGGTG CAGGTGTGGC CGCTGGTGGA GCGCTGGCTG CACAACCCGC TGCTGCCGGT GCATGCGTCC ACTGTCGTTG CGGAACCTGT GCCTGCCAGC TGA
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Protein sequence | MQSSSTLFPV ALLSAERRGD LSEDVYRIKA GNGPDPSVEL AITRLGLADQ AQAQGVPVIL LHGSFSNRRF WYSPKGVGLG AYLARAGFDV WIPEMRGHGL SPRNHDWKHN SVAAYARDDL PLINAFVREQ SGQAPHWVGH SLGGTTLVAA LGGGFLAAEQ LASVALFGTQ ISRVYWPLKV PPLAWGAKLV LKRWGQISGP RFKRGPEDEP IGLALESMRW HGLFGRFGDK QNDWWAGLAE VDVPLLAVAG AGDFQDPVWA CRKLFEQLGG ERKQFLRLGR EEGFEAFGHV DMLVSKAAQV QVWPLVERWL HNPLLPVHAS TVVAEPVPAS
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