| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2080 |
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| Symbol | |
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| ID | 1042774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2367054 |
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| End bp | 2372045 |
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| Gene Length | 4992 bp |
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| Protein Length | 1663 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637145494 |
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| Product | NAD-glutamate dehydrogenase |
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| Protein accession | NP_744230 |
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| Protein GI | 26988805 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.264525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGCGC ACGTTCAACG TCTGGTTTTT TACCGTCCGT CATGCCACGG GTTGGCTATC
GTTGATCCGT ACACGGCGCA CGCAGCGACG CTTCAATTAT TACAAAGCCC AAGCGGAGTA
CCACAGATGG CGTTCTTCAC CGCAGCCAGC AAAGCCGACT TCCAGCATCA ACTGCAAGCG
GCCCTGGCGC AGCACATCAG CGAACAGTCC CTGCCACAAG TGGCGCTGTT CGCCGAGCAG
TTCTTCGGCA TCATCTCTCT GGACGAACTC ACCCAGCGCA GGCTTTCCGA CCTGGCCGGC
TGCACCCTGT CAGCCTGGCG CATCATCGAG CGTTTCGACC CCGAATACCC GCAAGTGCGG
GTGTACAACC CTGATTACGA ACGCAATGGC TGGCAGTCGA CCCATACCGT GGTCGAAGTG
CTGCACCATG ACCTGCCGTT CCTGGTCGAC TCGGTGCGCA CCGAGCTCAA CCGCCGTGGC
TACAGCATCC ACACCCTGCA AACCACCGTG CTCAGCGTGC GCCGTGGCGC CAAGGGCGAG
CTGTTGGAGC TGCTGCCCAA GGGAACCCAG GGCGAAGGCG TGCGCTACGA GTCACTGATG
TACCTGGAGA TCGACCGCTG CGCCAATGCC GCCGAGCTGA CAGTGCTGAC CCGCGAGATC
GAGCAGGTGC TGGCCGAGGT ACGGGTGGTG GTGGCCGACT TCGAACCGAT GAAGGCCAAG
CTGCGTGAAG TGGTAGCGCA GGTGGAGCAA ACCGCCTTTG GCCCCGCCCA AAACGAGAAA
GGCGAAGTCA AGGCCTTCCT CGAATGGCTG CTGGATAACC ACTTCACCTT CCTGGGCTAT
GAAGAATTCA CCGTCAAGGG CGACGCCGAT GGCGGCCAGA TGGTCTACGA CGAGCAGTCG
TTCCTCGGCC TGCCGCGCCG TCTGCGCGTG GGCCTGACCG CAGAAGAGCT GCGCATCGAA
GACTACGCTG TGGCCTACCT CAACGAGCCG CTGCTGCTGT CGTTCGCCAA GGCCGCACTG
CCCAGCCGCG TGCACCGCCC GGCCTACCCG GACTACGTGT CGATCCGCCA GCTGGACGCC
GACGGCAAGG TCATCAAGGA GCACCGCTTC ATGGGGCTGT ACACCTCGTC GGTGTATGGC
GAAAGCGTGC ATGCCATTCC GTACATCCGC GTGAAGGTGG CCGAAGTCGA GCGCCGTTCG
GGCTTTGATC CCAAGGCCCA CCTGGGCAAG GAACTGGCCC AGGTGCTGGA AGTGCTGCCG
CGCGACGACC TGTTCCAGAC GCCGATCGAC GAGCTGTTCA GCACGGTCAT GGCAATCGTG
CAGATCCAGG AGCGCAACAA GATCCGCGTG TTCCTGCGTA AAGACCCGTA TGGCCGCTTC
TGCTACTGCC TGGCCTACGT CCCGCGTGAA ATCTATTCCA CCGAAGTACG GCAGAAGATC
CAGCAGGTGC TGATGGAGCG CCTGAAGGCC AGCGACTGCG AGTTCTGGAC CTTCTTCTCC
GAATCGGTAC TGGCCCGTGT GCAACTGATC CTGCGGGTCG ACCCCAAGAA CCGTATCGAC
ATCGACCCGC AGCAGCTGGA ACGCGAAGTC ATCCAGGCCT GCCGCTCGTG GCATGACGAC
TACTCGGCAC TGGTGGTGGA GAACTTCGGC GAAGCCCAGG GCACCAACAT CCTCGCCGAT
TTCCCCAAAG GCTTCCCGGC CGGTTACCGC GAGCGCTTCG CCGCGCACTC GGCGGTGGTC
GACCTGCAGC ATGTGCTGAA CCTGTCGGAA AGCAAGCCGC TGGCCATGAG CTTCTACCAG
CCGTTGACCC AGGTGGGCGA GCGCATCCTG CACTGCAAGC TGTACCACGC CGACACCCCG
CTGGCGCTGT CCGACGTGCT GCCGATTCTG GAAAACCTCG GCCTGCGCGT GCTCGGCGAG
TTCCCGTACC GCCTGCGCCA TGCCAATGGC CGCGAATACT GGATCCACGA CTTCGCCTTC
ACCTACAGCG AAGGCCTGAG CCTGGACATC CAGCAGCTCA ACGACACCCT GCAGGACGCC
TTCATCCACA TCGTCCGTGG TGACGCCGAG AACGACGCTT TCAACCGCCT GGTGCTCACC
GCCGGCTTGC CGTGGCGCGA CGTGGCCTTG CTGCGTGCCT ACGCCCGTTA CCTGAAACAG
ATCCGTCTGG GCTTCGATCT GGGCTATATC GCCAGCACCC TGAACAACCA CACCGACATC
GCCCGTGAGC TGACCCGGTT GTTCAAGACC CGCTTCTACC TGGCGCGCAA GCTTACCCAG
GACGACCTTG ACGACAAGCA GCAGCGCCTG GAACAGGCCA TCCTGAGCGC CCTGGATGAC
GTGCAGGTGC TCAACGAAGA CCGCATCCTG CGGCGCTACC TGGACTTGAT CAAGGCCACC
CTGCGTACCA ACTTCTACCA GCCCGACGCC AACGGCCAGA ACAAGTCGTA CTTCAGCTTC
AAGTTCAACC CCAAGCTGAT CCCCGAACTG CCCAAACCGG TGCCAAAGTT CGAGATATTC
GTCTATTCGC CGCGCGTCGA GGGCGTGCAC CTGCGCTTTG GCAACGTTGC CCGTGGTGGC
CTGCGCTGGT CCGACCGCGA AGAGGACTTC CGTACCGAAG TGCTGGGGCT GGTGAAAGCC
CAGCAGGTGA AGAACTCGGT CATCGTGCCG GTCGGCGCCA AGGGTGGTTT CCTGCCGCGT
CGCCTGCCGC TGGGCGGCAG CCGTGACGAG ATCGCCGCCG AAGGCGTGGC GTGCTACCGC
ATCTTCATTT CCGGCCTGCT CGACATCACC GACAACCTCA AGGACGGTGG CGTGGTGCCG
CCGGCCAACG TGGTGCGTCA TGACGATGAC GACCCGTACC TGGTGGTAGC GGCCGACAAA
GGCACCGCGA CCTTCTCCGA CATCGCCAAC GGCATTGCCA TCGACTACGG CTTCTGGCTT
GGCGATGCCT TTGCCTCGGG CGGCTCGGCC GGTTACGACC ACAAGAAGAT GGGCATTACC
GCGCGCGGCG CCTGGGTGGG CGTGCAGCGT CACTTCCGCG AGCGTGGCAT CAACGTGCAG
GAAGACCCGA TCACCGTCAT TGGTGTGGGC GATATGGCCG GCGACGTGTT CGGCAATGGC
CTGCTGATGT CCGACAAGCT GCAACTGGTG GCTGCGTTCA ACCACCTGCA TATCTTCATC
GACCCCAACC CCGACCCTGC CACCAGCTTT GCCGAGCGCA AGCGCCTGTT CGACCTGCCG
CGTTCGGCCT GGAGCGACTA CGACACCAGC ATCATGTCCG AAGGCGGCGG GATCTTCCCG
CGCAGTGCCA AGAGCATCGC CATCAGCCCG CAGATGAAAG AGCGCTTCGC CATCGAAGCC
GACCGCCTGA CCCCGACCGA GCTGCTGAAC GCGCTGCTCA AGGCCCCGGT GGACCTGCTG
TGGAACGGCG GCATCGGTAC CTACGTGAAG GCCAGCACTG AAAGCCACGC CGATGTCGGC
GACAAGGCCA ACGATGCGCT GCGGGTCAAC GGTAACGAAC TGCGCTGCAA GGTAGTGGGC
GAGGGCGGCA ACCTGGGCAT GACCCAGCTC GGCCGCGTCG AGTTCGGCCT GAACGGCGGC
GCCACCAACA CCGACTTCAT CGACAACGCC GGCGGCGTGG ACTGCTCCGA CCACGAGGTC
AACATCAAGA TCCTGCTCAA CGAAGTGGTG CAGGGTGGCG ACATGACCGA GAAGCAGCGC
AACCAGCTGC TGGGCAGCAT GACCGACGAA GTGGCCGGCC TGGTGCTGGG CAACAACTAC
AAGCAGACCC AGGCGCTTTC GCTGGCCGCT CGCCGCGCCC GCGAGCGGAT TGCCGAGTAC
AAGCGCCTGA TGGCCGACCT CGAGGCGCGG GGCAAGCTGG ACCGTGCCAT CGAATTCCTG
CCGTCCGAAG AGCAGTTGGC CGAACGCCTG GCTGCCGGCC AGGGCCTGAC CCGCGCCGAG
CTGTCGGTGC TGATCTCGTA CAGCAAGATC GACCTCAAGG AGCAACTGCT CAAGTCGCTG
GTGCCGGACG ACGACTACCT GACCCGTGAC ATGGAAACCG CTTTCCCGCC GTCCCTGGTC
AGCAAGTTCG CCGAGGCCAT GCGCCGCCAC CGCCTGAAGC GCGAAATCGT CAGCACCCAG
ATCGCCAACG ACCTGGTCAA CAACATGGGT ATCACCTTCG TCCAGCGCCT GAAGGAGTCG
ACCGGCATGA GCCCGGCCAA CGTGGCCGGT GCTTACGTGA TCGTGCGCGA TATCTTCCAC
CTGCCGCACT GGTTCCGCCA GATCGAGGCG CTGGACTATC AGGTGCCGGC AGAGATCCAG
CTCACCCTGA TGGACGAGCT GATGCGACTG GGCCGCCGAG CCACCCGCTG GTTCCTGCGT
AGCCGCCGCA ACGAACAGGA CGCCGGGCGC GATACCGCGC ACTTCGGGCC GAAGATCGCG
CAGCTGGGTC TGAAGCTGGA TGAGCTGCTC GAAGGCCCTA CCCGCGAACG CTGGATGGTC
CGCTACCAGG GCTTTGTCGA CGCCGGTGTG CCGGAGTTGC TGGCGCGTAT GGTGGCGGGT
ACCAGCCACC TGTACACCCT GCTGCCGATC ATTGAAGCGG CCGACGTGAC CGGCCATGAG
CCTGCGCAGG TGGCCAAGGC ATTCTTCGCC GTGGGCAGCG CGCTGGACCT GACCTGGTAC
CTGCAGGAAA TCAGCAACCT GCCGGTGGAA AACAACTGGC AGGCGCTGGC GCGCGAGGCA
TTCCGCGACG ATATCGACTT GCAGCAGCGG GCGATCACCA TTTCAGTCCT GCAGATGGCC
GATGCACCGC AAGACATGGA TGCCCGCGTG GCGCTGTGGT CAGAGCAGCA TCGGGGAATG
GTGGAGCGCT GGCGCGCCAT GCTCGACGAC CTGCGCAATG CCACGGGCAC TGACTATGCG
ATGTACGCGG TGGCCAACCG CGAGCTGGTC GACCTGGCCA TGAGCGGGCA GGCAGCGGTG
GTGCCGTCCT GA
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| Protein sequence | MPAHVQRLVF YRPSCHGLAI VDPYTAHAAT LQLLQSPSGV PQMAFFTAAS KADFQHQLQA
ALAQHISEQS LPQVALFAEQ FFGIISLDEL TQRRLSDLAG CTLSAWRIIE RFDPEYPQVR
VYNPDYERNG WQSTHTVVEV LHHDLPFLVD SVRTELNRRG YSIHTLQTTV LSVRRGAKGE
LLELLPKGTQ GEGVRYESLM YLEIDRCANA AELTVLTREI EQVLAEVRVV VADFEPMKAK
LREVVAQVEQ TAFGPAQNEK GEVKAFLEWL LDNHFTFLGY EEFTVKGDAD GGQMVYDEQS
FLGLPRRLRV GLTAEELRIE DYAVAYLNEP LLLSFAKAAL PSRVHRPAYP DYVSIRQLDA
DGKVIKEHRF MGLYTSSVYG ESVHAIPYIR VKVAEVERRS GFDPKAHLGK ELAQVLEVLP
RDDLFQTPID ELFSTVMAIV QIQERNKIRV FLRKDPYGRF CYCLAYVPRE IYSTEVRQKI
QQVLMERLKA SDCEFWTFFS ESVLARVQLI LRVDPKNRID IDPQQLEREV IQACRSWHDD
YSALVVENFG EAQGTNILAD FPKGFPAGYR ERFAAHSAVV DLQHVLNLSE SKPLAMSFYQ
PLTQVGERIL HCKLYHADTP LALSDVLPIL ENLGLRVLGE FPYRLRHANG REYWIHDFAF
TYSEGLSLDI QQLNDTLQDA FIHIVRGDAE NDAFNRLVLT AGLPWRDVAL LRAYARYLKQ
IRLGFDLGYI ASTLNNHTDI ARELTRLFKT RFYLARKLTQ DDLDDKQQRL EQAILSALDD
VQVLNEDRIL RRYLDLIKAT LRTNFYQPDA NGQNKSYFSF KFNPKLIPEL PKPVPKFEIF
VYSPRVEGVH LRFGNVARGG LRWSDREEDF RTEVLGLVKA QQVKNSVIVP VGAKGGFLPR
RLPLGGSRDE IAAEGVACYR IFISGLLDIT DNLKDGGVVP PANVVRHDDD DPYLVVAADK
GTATFSDIAN GIAIDYGFWL GDAFASGGSA GYDHKKMGIT ARGAWVGVQR HFRERGINVQ
EDPITVIGVG DMAGDVFGNG LLMSDKLQLV AAFNHLHIFI DPNPDPATSF AERKRLFDLP
RSAWSDYDTS IMSEGGGIFP RSAKSIAISP QMKERFAIEA DRLTPTELLN ALLKAPVDLL
WNGGIGTYVK ASTESHADVG DKANDALRVN GNELRCKVVG EGGNLGMTQL GRVEFGLNGG
ATNTDFIDNA GGVDCSDHEV NIKILLNEVV QGGDMTEKQR NQLLGSMTDE VAGLVLGNNY
KQTQALSLAA RRARERIAEY KRLMADLEAR GKLDRAIEFL PSEEQLAERL AAGQGLTRAE
LSVLISYSKI DLKEQLLKSL VPDDDYLTRD METAFPPSLV SKFAEAMRRH RLKREIVSTQ
IANDLVNNMG ITFVQRLKES TGMSPANVAG AYVIVRDIFH LPHWFRQIEA LDYQVPAEIQ
LTLMDELMRL GRRATRWFLR SRRNEQDAGR DTAHFGPKIA QLGLKLDELL EGPTRERWMV
RYQGFVDAGV PELLARMVAG TSHLYTLLPI IEAADVTGHE PAQVAKAFFA VGSALDLTWY
LQEISNLPVE NNWQALAREA FRDDIDLQQR AITISVLQMA DAPQDMDARV ALWSEQHRGM
VERWRAMLDD LRNATGTDYA MYAVANRELV DLAMSGQAAV VPS
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