| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2060 |
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| Symbol | soxR |
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| ID | 1042843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2343847 |
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| End bp | 2344302 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637145474 |
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| Product | transcriptional regulator SoxR |
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| Protein accession | NP_744210 |
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| Protein GI | 26988785 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR01950] redox-sensitive transcriptional activator SoxR |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGCGG ACAACACACG GATGCTCACA GTGGGTGAAG TGGCCAAGCG CAGCGGCGTG
GCGGTGTCTG CGCTGCACTT CTACGAAACC AAGGGGCTGA TCGCCAGCGT CCGCACGGCT
GGCAACCAGC GCCGCTATCC CTCGCTGGTG CTGCGTACCC TGGCGATCAT CAAGGTAGCC
CAGCGCACGG GAATTCCGCT TGAGGAAATC AAACAAGCCT TCAGCCGTTA TGCCCCCAAC
AGCAAGCTCA CGGCCGCACA ATGGAGCGAG ATGTCCACGG CCTGGCGCGA AGACCTGAAT
GCCCGCATTC GCACACTGGA AGCACTGCGC GACAGCCTCG ACAACTGCAT TGGCTGCGGT
TGCCTGTCGC TGGAGGACTG CCCACTGCGC AACCCCGAGG ATGTGCTGGG CAAGGAAGGG
ACCGGGGCGC GGATCCTCGA AAAGAAGGCA CGCTAA
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| Protein sequence | MAADNTRMLT VGEVAKRSGV AVSALHFYET KGLIASVRTA GNQRRYPSLV LRTLAIIKVA
QRTGIPLEEI KQAFSRYAPN SKLTAAQWSE MSTAWREDLN ARIRTLEALR DSLDNCIGCG
CLSLEDCPLR NPEDVLGKEG TGARILEKKA R
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