Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2054 |
Symbol | |
ID | 1042857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2337165 |
End bp | 2338058 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145468 |
Product | LysR family transcriptional regulator |
Protein accession | NP_744204 |
Protein GI | 26988779 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.142115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATATG AGCTGCAAGA CATCAGATCT TTCGTGAAAA TCGCCGAACT GGGCAGTTTC CATGAGGCCG CCGAAGCGCT CCACTTGTCC CAGCCGGCCC TGAGCCGACG GATCAAGAAG CTGGAGGAAG GCCTGGGCAC CTCGCTACTG GAACGCACCA CTCGCCGGGT CAGCCTGACC AGCGTGGGCC GCGACTTCCT GCCCAAGGCC AGGCGCCTGC TGGATGATTT TGAAGACTCG ATCCTCAGCA TCCGCGAGCT GGCCGAGCGC CAGACCGGTC AGGTTACCCT CGCCTGCATT CCTACCGCGG CGTTCTACTT CCTGCCGTCG GTGATCCGCG ATTACAACGA GCAATACCCG AAAATCCGCA TTCGCCTGCT GGACCTTAGC GCCAACGACG GGCTCGAAGC CGTGCTGCGC GGCGAGGCCG ACTTCGGCAT CAACATGATG AGTGGCCAGC ACCCGGACAT CGAGTTTGTC TCGCTGGTGC AGGAGCACTT TGTACTGGCC TGCCGGCGTG ACCACCCACT GGCGAATCGC GCCTCCGTTA CCTGGACAGA GCTGGCTGAT TACCGCCTGA TCGGCGTCGG CCGCCTGAGT GGCAACCGCA TGCTGCTGGA CCATGCGTTG TCCGGGCTCA ACCTGCGGCC CAAGTGGTTC TACGAAGTGC AACACCTGTC CACGTCGCTG GGCATGGTCG AGGCCGGGCT GGGCGTGTCG GCCATGCCCA GCCTGGCCAT GCCCAATGCC GACCACCCCA CGCTGGTGAG CGTGCCGTTG ATCGAGCCGC AAGTCACCCG CACGCTAGGG CTGGTGTACC GGCGCGGCGC ATCGCTGTCG CCGGCTGCGG AGAAATTCGT TTCGATCCTG CTGCAGAAAT GGCCAAATCG CTGA
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Protein sequence | MEYELQDIRS FVKIAELGSF HEAAEALHLS QPALSRRIKK LEEGLGTSLL ERTTRRVSLT SVGRDFLPKA RRLLDDFEDS ILSIRELAER QTGQVTLACI PTAAFYFLPS VIRDYNEQYP KIRIRLLDLS ANDGLEAVLR GEADFGINMM SGQHPDIEFV SLVQEHFVLA CRRDHPLANR ASVTWTELAD YRLIGVGRLS GNRMLLDHAL SGLNLRPKWF YEVQHLSTSL GMVEAGLGVS AMPSLAMPNA DHPTLVSVPL IEPQVTRTLG LVYRRGASLS PAAEKFVSIL LQKWPNR
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