| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2046 |
|---|
| Symbol | |
|---|
| ID | 1042867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2327402 |
|---|
| End bp | 2328325 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637145460 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | NP_744196 |
|---|
| Protein GI | 26988771 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.663633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATATA TTTTCAGCAT GAATATTTCG AACTTCGACC TGAACCTGCT GCGCGTCTTC
GACATGTTGC TGCGTGAACA GAATGTATCC CGGGCAGCCG AGCGTCTGGC CCTGACCCAG
CCGACCGTGA GCAATGCCCT GGCGCGCCTG CGTGACCAGC TGGGTGACCC GCTGCTGGTC
CGCGTGGGCC GGCGCATGCG CCCGACGCCA CGGGCCTTGG CACTGGAGGG GCCGATACGT
GCGGCGTTAC AGCAGATCGA GCAGACGCTG GGCACCGGCG ATGGTTTCGA GCCTCAGCGC
AGCCATCGCC AGCTGCGCAT CGCCCTCACC GATTTCGTCG AACAGCTGTG CATGCCGCCA
CTCCTGGCGC GGCTGGAGCT ACTGGCACCC AACGTGCGCA TCGACGTGGT GCACCTGGCC
CCCAACCTGC CGGCCGAGGC GCTGGACCGG GGCGACCTCG ACCTGGTACT GGGCCGTTTC
GACGAGGTGC CGGCGCGCTT CACCCGCCAC CCCTGGCGCC GTGAAACCCT GCAGATCGCG
CTGCGCCAGC AGCACCCGCA CCTGGCGCCG GGCCAGGCAC TGGACCTCGA CGCATTCCTG
GGCTTGCGGC ACATCTGGGT GCACGGCGGC CAGACCCGGG GCATGGTCGA CCAGTGGCTG
GCCGAGCAAG GCCTGACCCG GCAAATCGCC TATACCACGC CCAACTACCT GCAGGCCGCC
CATCTGGCCG CAGCCACCGA CATGTGTGTG GTGCTGCCGC GGCAACTGGC GCAGCAGTTT
GCGCACCTGC TGCCATTGGC GGTGCACGAA CTGCCATTTG CCCTGGAGCC TTTCGAATTG
GAAGTGGTGC ACCTGAGCCA CCGTCAGCAC GACCCCGCCC TGGCCTGGCT GGTCGAACAG
ATCCTCACGC TCCCCCCCGC CTGA
|
|---|
| Protein sequence | MPYIFSMNIS NFDLNLLRVF DMLLREQNVS RAAERLALTQ PTVSNALARL RDQLGDPLLV
RVGRRMRPTP RALALEGPIR AALQQIEQTL GTGDGFEPQR SHRQLRIALT DFVEQLCMPP
LLARLELLAP NVRIDVVHLA PNLPAEALDR GDLDLVLGRF DEVPARFTRH PWRRETLQIA
LRQQHPHLAP GQALDLDAFL GLRHIWVHGG QTRGMVDQWL AEQGLTRQIA YTTPNYLQAA
HLAAATDMCV VLPRQLAQQF AHLLPLAVHE LPFALEPFEL EVVHLSHRQH DPALAWLVEQ
ILTLPPA
|
|---|
| |