Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2045 |
Symbol | |
ID | 1042868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2325339 |
End bp | 2327300 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637145459 |
Product | metallo-beta-lactamase family protein |
Protein accession | NP_744195 |
Protein GI | 26988770 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCTTTT CACTGTCGAT GCTGGCGCTT GCCCTGCTGG CCCCCCTTCC GAGCCTGGGC GCAACAGCGG CCAAGGATGC CACCGCGGCC ACCCTGGCCA GCAACCAGCA GTGGCTGCAA CGGTTGCCTT TCGAGGATCG CGTCGATTAC GAAACAGCCC GGCGTGGGCT GGTCGAGCGG TTCAACGGGC CAGTCGCCAC GGCCGATGGC AAGACGGTGT GGAACCTGGC CCAGTATGCT TTTCTGGAAC CGGCGCAATC CCCTGCCACG GTAAACCCGA GCTTGTGGCG CATCGCTCAG TTGAACAACA TCGCCGGGCT GTTCAAGGTC ACCGAGGGCA TCTACCAGCT TCGCGGTCTG GACCTGGCCA ACATGACCAT CGTCGAAGGG AAGGACGGGC TGATTGTGCT TGACCCGCTG CTTGCCGTGG AGACTGCCAA GGCGGGCCTC GAACTGTACT TCAAGCACCG CCCGCGCAAG CCGGTGACCA CGGTGATCTA CACCCACCCG CACGTCGACC ATTTCGGCGG CGTGCGCGGG GTGATCAACG AGGCGGACGT CAAGGCTGGC AAAGTCCAGG TCATCGCGCC CGAGGGGTTC TTCGAACATG CCATCGGCGA AAACGTGCTG GCCGGACCGG CCATGAAACG CCGCGCCCAG TACATGTACG GCGCCCCCCT GCCCCGTGGG CCGCGAGGCC AGGTGGATGC CGGACTGGGC AAGGGCGTGC CGGCCAATGC CACTGTCAGC CTCATCGCGC CGACGCTCGA AATCAGCCAA CCGCTGCAAC GCATGACCCT GAGCGGCGTG GAGGTGGAGT TCCAGCTGAC CCCGGGCACC GAGGCGCCGG CGGAAATGAA CATTTATTTC CCGGCGCTCA GGGCACTGTG CATGGCCGAG AACGCCACCC ATGTGCAGCA CAACGTACTG ACGCTGCGCG GGGCCCTGGT GCGCGATCCG AAAGTGTGGG CCCATTACCT GGACCAATCG CTGGTGCGCT ACGGCGAGCA GGCCGAGGTG GTGTTCGCCC AGCATCACTG GCCCACTTGG GGTGGTGCGG CCATCCGCGA CTACCTGGCC GACCAGCGCG ATATGTATGC CTTCATCGAC AGCCAGACCT TGCGCCTGAT CAATCAGGGC CAGACCCCCA TGGAAATTGC CCAGACCCTG GCCAGCCTGC CGCCGCGCCT GGCAAGCAAA TGGTACAGCC GCGACTACTA CGGCTCGCTT AGCCATAACG TCAGGGCCGT CTATCAACGC TACATGGGGT TCTACGACGG CAACCCGGCC AACCTCGACC CATTGCCACC GCAAGCGGCC GGCAAGCGTT ACGTGGCGGC GATGGGGGGT GCCGATCAGG TGCTGACCCA GGCCCGCCAG GCCTTCGCCG AGGGCGACTA TCGCTGGGTG GCGCAATTGG CCAACCACCT GGTATTCGCC GAGCCAGACA ACACCGAGGC CCGCGAACTG CAGGCCGACG CGCTGGAGCA ACTGGGTTAC CAGAGTGAGA ACGCCACCTG GCGCAATGCC TACCTCAGTG GCGCGCAGGA ATTGCGCTCA GGCGTTGCCG CCGGTGCGGG TAGCGGCGGC AACGCCGATG ACATGGTGCG GGCCCTGACA CCCAGCCTGT TTTTCGACTA CCTGGGTGTT CGGGTGAATG CCTACAACGC TGCCGATAGC AACCTGACCA TCAACTGGCG GTTTTCCGAC CTGGACGAAG ACTACGCCCT CACCCTGCGC AACGGCGTCC TCACCCACCG CGACCTGGCG CGCCACGCCA AGGCCGATGT AGAGGTCATC ATGCGCAAAC AGACACTGGA CAGCATTGCC TTGAAGCAGA CAGGCTTTCT CAAGGAAGCC ACAGCAGGGG CAATCGAAAT CAAAGGCGAG CGGGTGAAGT TCCTGCAATT CATGGGGGGG CTGGAAGAGG CTGATTCGCG CTTCAATATC GTCACGCCCT GA
|
Protein sequence | MRFSLSMLAL ALLAPLPSLG ATAAKDATAA TLASNQQWLQ RLPFEDRVDY ETARRGLVER FNGPVATADG KTVWNLAQYA FLEPAQSPAT VNPSLWRIAQ LNNIAGLFKV TEGIYQLRGL DLANMTIVEG KDGLIVLDPL LAVETAKAGL ELYFKHRPRK PVTTVIYTHP HVDHFGGVRG VINEADVKAG KVQVIAPEGF FEHAIGENVL AGPAMKRRAQ YMYGAPLPRG PRGQVDAGLG KGVPANATVS LIAPTLEISQ PLQRMTLSGV EVEFQLTPGT EAPAEMNIYF PALRALCMAE NATHVQHNVL TLRGALVRDP KVWAHYLDQS LVRYGEQAEV VFAQHHWPTW GGAAIRDYLA DQRDMYAFID SQTLRLINQG QTPMEIAQTL ASLPPRLASK WYSRDYYGSL SHNVRAVYQR YMGFYDGNPA NLDPLPPQAA GKRYVAAMGG ADQVLTQARQ AFAEGDYRWV AQLANHLVFA EPDNTEAREL QADALEQLGY QSENATWRNA YLSGAQELRS GVAAGAGSGG NADDMVRALT PSLFFDYLGV RVNAYNAADS NLTINWRFSD LDEDYALTLR NGVLTHRDLA RHAKADVEVI MRKQTLDSIA LKQTGFLKEA TAGAIEIKGE RVKFLQFMGG LEEADSRFNI VTP
|
| |