| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2028 |
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| Symbol | |
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| ID | 1042890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2304835 |
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| End bp | 2306553 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637145442 |
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| Product | TPR domain-containing protein |
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| Protein accession | NP_744178 |
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| Protein GI | 26988753 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACT TGTGGCCCCA ATGGCTGCGC CCGCTCTGGC TGCTGGCGGT TCCCGTGCTC
GGCTGGCTGC TGTACAAACT GTGGCACCGG CGCAAGCGCG CCGGGCGCTG GCAGATGATT
CTGCCGCCAG CCTTCCACGG TGTACTGCTG GGTGGCGGCA GCGGCAGCAC CAGCAAACTG
CCGTGGGTGG CGCTGGGCCT TGCCTGGTTA CTGGTGATCC TGGCGCTGCT CGGGCCCAGC
TGGCAGCGGC TGGAAGAAAG CCGTCAGCGC CCGGCCGACC CGCTGGTGAT CCTGCTCGAA
CTGACCCCGC AAATGCTCGC CGAGGACAGC CCGCCCAACC GCCTGGAACA GGCCCGGCGC
AAGATCCTCG ACCTGCTTGA ACACCGCCGC GACAGCCAGA CGGCGCTGGT GGTGTATGCC
GGCTCCGCGC ACACCCTGGT GCCGCTGTCC GACGACCTGG CCACCACCCG CAATTTGCTC
GAGGCCATCG ACCCGTCGAT CATGCCCAAA CCCGGCCAGC GTGCCGACCT GGCCGTGCAA
AAAGGCCTGG CGCTCCTGGC CCAGAGCGGC CTCGGCCAAG GCCGCCTGCT GCTGGTAGGC
TCAGCGCTCA GCGCCGCCGA GCGCCAGGGC ATCACCCAGG CCCTCGGCCG CCAGGGCCCA
AGCCTGCTGA TGCTGGGCAT CGGCAGCCGC GAAGGCGCCC CGGTGCGCCA GGCCAATGGC
GAATACCTTA AAGACGACCA GGGCGGCATC CTCTTGCCTC GCCTGGACAG CGCCAGCCTG
AAGGGTTTTA TCAGCGGCAC GGGCGGGCGC TACCGGCACG CCCGCATCGA CGACCTCGAC
CTGCGTGGCC TGGGCCTGTT CGACAACCCG CGGAGCGGGC GCAATGACGG CCAGACCCTG
CAACTGGACA GCTGGGCCGA CCAAGGTTAC TGGCTGCTGA TTCCGTTGTT GCTGCTGGCC
GCCTGCGCCG GCCGGCGCGG CTGGCTGTTC TGCCTGCCGC TACTGCTGGC CTTGCCGCAG
CCTGGCCAGG CTTTCGAGCT CAACGACCTG TGGCTGCGCC CCGACCAGCA AGGCCAGAAG
CTGCTGGAGC AAAACCGCCC GGCCAGCGCT GCGCGTCACT TCCAGAACCC GCAATGGCGC
GGCATGGCCC TGTACCAGGC CGGCGACTAT GCCGGTGCCG CCGAGGCATT TTCCCAAGGC
GACACTGCAG CAGCCCACTA CAATCGAGGC AATGCCCTGG CCCGCAGTGG CGAGCTGGAA
GCCGCCCTGG ATGCCTACGA GCAAGCCCTG GAGCGTCAGC CCGACCTGCA GGCCGCGCTG
GACAACCAGG CGCTGGTGCA GCAACTGCTG CAACAACGTG AAGCCAAGGC CGAGGAACAA
CCGCCCGGCA GCGATGCCCA AGACACGCCC GGCAGCGAAA CCGAAGGCAA CAGCAGCTCG
GCCAGCAGCC CGGCCCAAGG CACACCCGGC GACGACCAAC AGGCCAGCCC CGAACAACCC
GGCGAAAGCA GCAGCAACAG CCAGGCCGCC CCCGGCAACC AGGCCGGGAG CGACGACAGT
GTCATCCAGC CGCCACAGCG CCCGGTGTCG ACCAGCCTCG ACGGCGAACA GCGCCAAGCC
CTGGAGCAAT GGCTGCGGGA AATCCCCGAC AACCCGGCAG AGCTGCTGCG ACGCAAATTC
TGGTATGAAC AGCAATTGCA TCAGGAAAAA TCACAATGA
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| Protein sequence | MIDLWPQWLR PLWLLAVPVL GWLLYKLWHR RKRAGRWQMI LPPAFHGVLL GGGSGSTSKL
PWVALGLAWL LVILALLGPS WQRLEESRQR PADPLVILLE LTPQMLAEDS PPNRLEQARR
KILDLLEHRR DSQTALVVYA GSAHTLVPLS DDLATTRNLL EAIDPSIMPK PGQRADLAVQ
KGLALLAQSG LGQGRLLLVG SALSAAERQG ITQALGRQGP SLLMLGIGSR EGAPVRQANG
EYLKDDQGGI LLPRLDSASL KGFISGTGGR YRHARIDDLD LRGLGLFDNP RSGRNDGQTL
QLDSWADQGY WLLIPLLLLA ACAGRRGWLF CLPLLLALPQ PGQAFELNDL WLRPDQQGQK
LLEQNRPASA ARHFQNPQWR GMALYQAGDY AGAAEAFSQG DTAAAHYNRG NALARSGELE
AALDAYEQAL ERQPDLQAAL DNQALVQQLL QQREAKAEEQ PPGSDAQDTP GSETEGNSSS
ASSPAQGTPG DDQQASPEQP GESSSNSQAA PGNQAGSDDS VIQPPQRPVS TSLDGEQRQA
LEQWLREIPD NPAELLRRKF WYEQQLHQEK SQ
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