Gene PP_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1998 
Symbol 
ID1043018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2266232 
End bp2266876 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content66% 
IMG OID637145408 
Productsporulation domain protein 
Protein accessionNP_744148 
Protein GI26988723 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.356998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTGC TGGATAAAGG GATGAAACAG CGCATGGTGG GTGCGCTGGT GCTGGTGGCG 
CTGGCGGTTA TCTTCCTGCC GATGCTGTTT ACCCGCCAGG ACGAGATGCG CCAGGTGCAC
GTCGAAGCCC CGCAGGCACC GGCCATGCCC AGCCTGCCGG AAGTGAAGGT GGAGCCGGTT
GCCGTGCCGG AGCCACAGGT TATTGCGCAG GAGGCGCAGC AGGCGCCGGT GGTGATCGAC
GAGGCCACTG CGCCGGCGAG TACACCCAGC CAGCCAATCA CCCCGTCGCC ACAGACCCAG
GCTCAGGTTC AGCCACCCAA GCCCCAGGCG CCCGCGCCCA AGGTGGAGGC CAAAGCTGCT
GCAACACCAG CACCTGCCGC GCCATCGAAG ATCGACGCCA ATGGCCTGCC CGTCAGTTGG
TCGATCCAGC TGGCCAGTCT GTCCAACCGC GCAGGAGCCG AAAAGCTGCA GCAAACCCTG
CGTAGCCAGG GTTACAACGC CTATATCCGT ACGGCGGGTG GCATGAACCG CGTTTACGTG
GGGCCGTTGA TCGAGCGCGC CGAGGCCGAG CGCGTGCGTG ACGCCATCAA CCGTCAGAAC
AGCCTCAAGG GCTTCGTGGT GCGCTTCCAG CCTGAGCGCA GCTGA
 
Protein sequence
MAVLDKGMKQ RMVGALVLVA LAVIFLPMLF TRQDEMRQVH VEAPQAPAMP SLPEVKVEPV 
AVPEPQVIAQ EAQQAPVVID EATAPASTPS QPITPSPQTQ AQVQPPKPQA PAPKVEAKAA
ATPAPAAPSK IDANGLPVSW SIQLASLSNR AGAEKLQQTL RSQGYNAYIR TAGGMNRVYV
GPLIERAEAE RVRDAINRQN SLKGFVVRFQ PERS