Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1998 |
Symbol | |
ID | 1043018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2266232 |
End bp | 2266876 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637145408 |
Product | sporulation domain protein |
Protein accession | NP_744148 |
Protein GI | 26988723 |
COG category | [S] Function unknown |
COG ID | [COG3147] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.356998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTGC TGGATAAAGG GATGAAACAG CGCATGGTGG GTGCGCTGGT GCTGGTGGCG CTGGCGGTTA TCTTCCTGCC GATGCTGTTT ACCCGCCAGG ACGAGATGCG CCAGGTGCAC GTCGAAGCCC CGCAGGCACC GGCCATGCCC AGCCTGCCGG AAGTGAAGGT GGAGCCGGTT GCCGTGCCGG AGCCACAGGT TATTGCGCAG GAGGCGCAGC AGGCGCCGGT GGTGATCGAC GAGGCCACTG CGCCGGCGAG TACACCCAGC CAGCCAATCA CCCCGTCGCC ACAGACCCAG GCTCAGGTTC AGCCACCCAA GCCCCAGGCG CCCGCGCCCA AGGTGGAGGC CAAAGCTGCT GCAACACCAG CACCTGCCGC GCCATCGAAG ATCGACGCCA ATGGCCTGCC CGTCAGTTGG TCGATCCAGC TGGCCAGTCT GTCCAACCGC GCAGGAGCCG AAAAGCTGCA GCAAACCCTG CGTAGCCAGG GTTACAACGC CTATATCCGT ACGGCGGGTG GCATGAACCG CGTTTACGTG GGGCCGTTGA TCGAGCGCGC CGAGGCCGAG CGCGTGCGTG ACGCCATCAA CCGTCAGAAC AGCCTCAAGG GCTTCGTGGT GCGCTTCCAG CCTGAGCGCA GCTGA
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Protein sequence | MAVLDKGMKQ RMVGALVLVA LAVIFLPMLF TRQDEMRQVH VEAPQAPAMP SLPEVKVEPV AVPEPQVIAQ EAQQAPVVID EATAPASTPS QPITPSPQTQ AQVQPPKPQA PAPKVEAKAA ATPAPAAPSK IDANGLPVSW SIQLASLSNR AGAEKLQQTL RSQGYNAYIR TAGGMNRVYV GPLIERAEAE RVRDAINRQN SLKGFVVRFQ PERS
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