| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1990 |
|---|
| Symbol | |
|---|
| ID | 1043034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 2256641 |
|---|
| End bp | 2257942 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637145401 |
|---|
| Product | ISPpu8, transposase |
|---|
| Protein accession | NP_744141 |
|---|
| Protein GI | 26988716 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.396033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.106664 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAC TTGCCTTGGA GCAGGCCATT GCGCCGGAGT GGGTCGATCA GGTTTTCGAG
GAGCACCGCC AACGGCAGTA TTCTCGCGAG CTGCTGTTCT CGACCATTAT CAAGTTGATG
TCGCTTGTTT CATTGGGCTT GAAGCCATCG CTGCATGCTG CGGCAAGACA ACTGGACGAC
CTTCCCGTCA GCCTGGCAGC TCTGTACGAC AAGATCAGTC GAACCGAACC TGCCCTGTTG
CGTGCTCTGG TGACAGGCTG CGCGCAGCGC TTGGCGCCGA CAATCCATGA GTTGGGCTGC
TCAGCCATGC TTCCTGATTG GCAAGTTCGG GTGGTCGATG GCAGCCACTT GGCCTCTACC
GAAAAGCGTC TTGGCGCGTT GCGCCAAGAG CGCGGAGCGG CTCGCCCCGG GTTTTCGGTG
GTGGTTTACG ACCCCGACCT GGATCAGGTA ATTGACCTCC AGCCGTGCGA GGACGCCTAC
GCAAGCGAAC GAGTTTGTGT TTTGCCGTTG CTGGCTGAAG CAAAGACCAA TCAGGTTTGG
ATCGCTGACC GTCTCTACTG CACGCTGCCT GTAATGGAGG CGTGCGAACA GGTGAAGACA
TCATTTGTCA TTCGCCAGCA GGCCAAGCAT CCACGCTTGA TCCAGGAAGG TGAGTGGCAA
GCACCGATGC CCGTCGCCAC AGGCACTGTG CGCGAGCAAT CCATCGAAGT AAAAGGCGGG
CACCGCTGGC GACGTGTCGA GTTAACGCTT CATTCACCAA ACGACTCAGG TGATAACAGC
TTGATGTTCT GGAGCAACCT GCCCGAGAGC ATCAGTGCGC AACAGATCGC AGACTTCTAT
CGGCGCCGCT GGAGCATTGA AGGGATGTTC CAGCGGTTGG AAGCAATTCT GGAAAGTGAA
ATTGAAACCC TCGGCAGTCC GCGAGCCGCC TTGCTTGGAT TCACCACTGC CGTGCTGGCA
TACAACGTTC TGGCCTTGCT CAAGCGAAGT GTTGAACAGG CTCACCGCGA TGCCTTGCCC
GAGAATTGGG AAGCCTCGAT CTATCACTTG GCGGTGCAGA TCAGAGGGGG TTACGAAGGC
ATGCAGATTG CCCTGCCATC CGAGTACATG CCCGTTGTTC CGATGGAAAA CCTGGCTCAG
CGCCTGCTGG AGCTGGCCAG AAACATCCAG CCCAGACAGG TTGCGAAAAG CCCACGAGGC
CCCAAGGTGC TCAAAGCTAA GGCCTGGGTG CAAGGGACGG CTGTACATGC TCATGTTTCG
ACGGATCGGG TCATCAAAGC CGCCAAAACC AAAAGACCTT GA
|
|---|
| Protein sequence | MAKLALEQAI APEWVDQVFE EHRQRQYSRE LLFSTIIKLM SLVSLGLKPS LHAAARQLDD
LPVSLAALYD KISRTEPALL RALVTGCAQR LAPTIHELGC SAMLPDWQVR VVDGSHLAST
EKRLGALRQE RGAARPGFSV VVYDPDLDQV IDLQPCEDAY ASERVCVLPL LAEAKTNQVW
IADRLYCTLP VMEACEQVKT SFVIRQQAKH PRLIQEGEWQ APMPVATGTV REQSIEVKGG
HRWRRVELTL HSPNDSGDNS LMFWSNLPES ISAQQIADFY RRRWSIEGMF QRLEAILESE
IETLGSPRAA LLGFTTAVLA YNVLALLKRS VEQAHRDALP ENWEASIYHL AVQIRGGYEG
MQIALPSEYM PVVPMENLAQ RLLELARNIQ PRQVAKSPRG PKVLKAKAWV QGTAVHAHVS
TDRVIKAAKT KRP
|
|---|
| |