| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1989 |
|---|
| Symbol | asd |
|---|
| ID | 1043035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 2254825 |
|---|
| End bp | 2255937 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637145400 |
|---|
| Product | aspartate-semialdehyde dehydrogenase |
|---|
| Protein accession | NP_744140 |
|---|
| Protein GI | 26988715 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.845659 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0244786 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTG TAGGTCTGAT CGGTTGGCGC GGTATGGTCG GTTCCGTGCT CATGCAGCGG
ATGCTGGAGG AGCAGGATTT CGACCTTATC GAGCCGGTGT TCTTCACTAC CTCCAATGTT
GGTGGCCAGG GTCCGAACGT GGGCAAGGAT ACAGCGCCCC TCAAGGACGC TTATTCGATT
GAAGAACTCA AGACCCTCGA CGTGATCCTG ACCTGCCAGG GTGGCGACTA CACCAACGAG
GTCTTCCCCA AGCTGCGTGA AGCCGGCTGG CAGGGTTACT GGATCGACGC CGCTTCGTCC
CTGCGCATGC AGGATGACGC GGTGATCATC CTCGACCCGG TCAACCGCAA GGTCATCGAC
CAGCAGCTGG ATGCCGGTAC CAAGAACTAC ATCGGTGGCA ACTGCACCGT CAGTCTGATG
CTGATGGGCC TGGGTGGCCT GTTCGAGGCC GGTCTGGTCG AGTGGATGAG CGCCATGACC
TACCAGGCGG CTTCGGGTGC CGGCGCGCAG AACATGCGCG AGCTGATCAA GCAGATGGGT
GCTACCCACG CGGCAGTGGC CGATGACCTG GCCAACCCGG CCAGCGCCAT TCTCGATATC
GACCGCAAGG TTGCCGAGAC CATGCGCAGC GAAGCGTTCC CGACCGAGAA CTTCGGCGTG
CCGCTGGCGG GCAGCCTGAT CCCATGGATC GACAAGGAAC TGCCGAACGG TCAGAGCCGC
GAAGAGTGGA AGGCCCAGGC CGAAACCAAC AAGATCCTCG GTCGCTTCAA GAGCCCGATC
CCGGTCGACG GCATCTGTGT GCGCATTGGC GCCATGCGCT GCCACAGCCA GGCGCTGACC
ATCAAGCTGA ACAAGGACGT GCCGATCGCC GACATCGAAG GCATGATCAG CCAGCACAAC
CCTTGGGTGA AGCTGGTGCC GAACCAGCGT GAAATCAGCA TGCAGGAGCT GACCCCGACC
AAGGTTACCG GCACCCTGAA CATCCCGGTT GGCCGTCTGC GCAAGCTGAA CATGGGGTCG
CAGTACCTGG GCGCGTTCAC CGTGGGTGAC CAGCTGCTGT GGGGCGCCGC CGAACCGCTG
CGCCGCATGT TGCGGATTCT GCTGGAGCGT TGA
|
|---|
| Protein sequence | MKRVGLIGWR GMVGSVLMQR MLEEQDFDLI EPVFFTTSNV GGQGPNVGKD TAPLKDAYSI
EELKTLDVIL TCQGGDYTNE VFPKLREAGW QGYWIDAASS LRMQDDAVII LDPVNRKVID
QQLDAGTKNY IGGNCTVSLM LMGLGGLFEA GLVEWMSAMT YQAASGAGAQ NMRELIKQMG
ATHAAVADDL ANPASAILDI DRKVAETMRS EAFPTENFGV PLAGSLIPWI DKELPNGQSR
EEWKAQAETN KILGRFKSPI PVDGICVRIG AMRCHSQALT IKLNKDVPIA DIEGMISQHN
PWVKLVPNQR EISMQELTPT KVTGTLNIPV GRLRKLNMGS QYLGAFTVGD QLLWGAAEPL
RRMLRILLER
|
|---|
| |