Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1982 |
Symbol | ibpA |
ID | 1043047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2245759 |
End bp | 2246208 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637145393 |
Product | heat shock protein Hsp20 |
Protein accession | NP_744133 |
Protein GI | 26988708 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.01007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0434236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGA CTACTGCTTT CTCTCTTGCT CCACTGTTCC GTCATTCCGT TGGTTTCGAC CGTTTCAACG ACCTGTTCGA ATCCGCGGCA CGTAACGAGG CCGGTAGCAG CTACCCGCCC TATAACGTGG AAAAGCATGG CGATGACCAC TACCGCATCG TGGTTGCTGC AGCCGGTTTC CAGGAAGAGG ACCTCGACCT GCAGGTCGAA AAAGGTGTCC TGACCGTGAC CGGTGGCAAG CGCGACAATA GCGCCGCTGA AGTGACCTAC CTGCACCAGG GTATCGCACA ACGCGCCTTC AAGCTGTCGT TCCGCCTGGC AGATCACATC GAAGTGAAGG CCGCCGGCCT GGCCAATGGC CTGCTCAGCA TCGACCTGCT GCGCATCGTG CCTGAAGAAG CCAAGGCCAA GCGCATTCCG ATCAATGGCG AAAAACCAGC GCTGAACTGA
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Protein sequence | MTMTTAFSLA PLFRHSVGFD RFNDLFESAA RNEAGSSYPP YNVEKHGDDH YRIVVAAAGF QEEDLDLQVE KGVLTVTGGK RDNSAAEVTY LHQGIAQRAF KLSFRLADHI EVKAAGLANG LLSIDLLRIV PEEAKAKRIP INGEKPALN
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