| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1974 |
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| Symbol | uvrB |
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| ID | 1043060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2234887 |
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| End bp | 2236902 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637145379 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | NP_744125 |
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| Protein GI | 26988700 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.238105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00441093 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGAGT TCCAGCTCGT CACACGTTTC CAGCCGGCTG GCGACCAGCC CGAGGCTATC
CGCCAGTTGG TCGAAGGCAT CGAGGCGGGG CTGTCGCACC AGACGTTGCT CGGGGTGACC
GGTTCGGGCA AGACCTTCAG CATTGCCAAC GTCATCCAGC AGGTGCAGCG CCCGACGCTG
GTGCTGGCGC CCAACAAGAC GCTGGCCGCC CAGTTGTACG GGGAGTTCAA GGCATTCTTC
CCCAACAACG CGGTGGAGTA CTTCGTTTCC TATTACGACT ACTACCAGCC GGAAGCCTAC
GTGCCGTCGT CGGACACCTT CATCGAGAAG GACGCCTCGA TCAACGACCA CATCGAGCAG
ATGCGCCTGT CGGCCACCAA GGCGCTGCTG GAGCGGCGTG ACGCGATCAT CGTGACCACT
GTGTCGTGCA TCTACGGCCT GGGCAGCCCC GAGACCTACC TGAAAATGGT CCTGCACGTT
GACCGTGGCG ACAAGCTCGA CCAGCGCGCG CTGCTGCGCC GCCTGGCCGA CCTGCAGTAC
ACCCGCAACG AAATGGACTT TGCCCGCGCC ACCTTCCGGG TACGCGGCGA CGTGATCGAC
ATCTTCCCGG CCGAATCGGA CCTGGAAGCC ATCCGCATTG AGCTGTTCGA TGATGAAGTG
GAGAACATCG CCGCCTTCGA TCCGTTGACC GGCGAGGTTT TCCGCAAGCT GCCACGTTTC
ACGTTCTACC CCAAGAGCCA CTACGTGACC CCGCGGGAAA CCCTGCTGGA AGCGGTGGAG
GGCATCAAGG AAGAACTGAA GGAGCGTCTG GAGTACCTGC ACAAGGCCAA CAAGCTGGTC
GAAGCGCAGC GTCTGGAGCA ACGCACCCGC TTCGATCTGG AGATGATCCT CGAGCTGGGC
TACTGCAACG GCATCGAAAA CTACTCGCGT TACCTGTCCG GGCGCCCGGC CGGGGCGCCG
CCGCCCACCC TGTACGATTA CCTGCCGCCC GATGCGCTGC TGGTGATCGA CGAATCACAC
GTCAGCGTTC CGCAGGTCGG CGCCATGTAC AAGGGCGACC GTTCACGCAA GGAGACCCTG
GTCGAGTACG GCTTCCGCAT GCCTTCCGCG CTGGACAACC GGCCGATGCG TTTCGACGAG
TGGGAGGATG TCAGCCCGCA GACCATTTTT GTTTCGGCCA CTCCGGGCCC CTACGAGGCT
GAGCATGCCG GGCGCGTGGT GGAGCAAGTG GTGCGCCCGA CCGGGCTGGT CGACCCGCAG
GTAGAGGTGC GCCCGGCGCT GACCCAGGTC GACGACCTGC TGTCCGAGAT CCGCAAGCGT
GTCGCGGCAG GCGAGCGAGT GCTGGCGACC ACGTTGACCA AACGCATGGC CGAGGACCTC
AGCGATTACC TGGCCGACCA CGACGTGCGG GTACGCTACC TGCACTCGGA CATCGACACG
GTGGAGCGGG TGGAGATTAT CCGCGACCTG CGCCTGGGCA CCTTCGACGT GCTGGTGGGC
ATCAACCTGC TGCGCGAGGG CCTGGACATG CCCGAGGTGT CGCTGGTGGC CATCCTCGAT
GCGGACAAGG AAGGTTTTCT GCGTTCCGAG CGCTCCCTGA TCCAGACCAT TGGCCGCGCG
GCACGTAACC TCAATGGCCG GGCCATTCTG TACGCCGATA ACGTAACAGG CTCCATGCAG
CGAGCCATCG ACGAAACCGA GCGCCGCCGC GAGAAGCAGA TCGCCTTCAA CGAAGCCAAC
GGCATCGTGC CCAAGGGCGT GGTCAAGGAC ATCACCGACA TCATGGAAGG TGCCACCGTG
CCCGGTGCGC GCAGCAAGAA GCGCAAGGGC ATGGCCAAGG CGGCGGAGGA GAGCGCCCGT
TACGAGGCCG AACTGCGTAC GCCGGGCGAG ATCACCAAGC GCATCAAGCA GTTGGAAGAG
AAAATGATGC AGTTCGCCCG CGACCTGGAG TTCGAAGCTG CGGCGCAGTT GCGTGACGAG
ATTGCGCAGC TGCGGGAGCG GTTGATCAGC AGCTGA
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| Protein sequence | MSEFQLVTRF QPAGDQPEAI RQLVEGIEAG LSHQTLLGVT GSGKTFSIAN VIQQVQRPTL
VLAPNKTLAA QLYGEFKAFF PNNAVEYFVS YYDYYQPEAY VPSSDTFIEK DASINDHIEQ
MRLSATKALL ERRDAIIVTT VSCIYGLGSP ETYLKMVLHV DRGDKLDQRA LLRRLADLQY
TRNEMDFARA TFRVRGDVID IFPAESDLEA IRIELFDDEV ENIAAFDPLT GEVFRKLPRF
TFYPKSHYVT PRETLLEAVE GIKEELKERL EYLHKANKLV EAQRLEQRTR FDLEMILELG
YCNGIENYSR YLSGRPAGAP PPTLYDYLPP DALLVIDESH VSVPQVGAMY KGDRSRKETL
VEYGFRMPSA LDNRPMRFDE WEDVSPQTIF VSATPGPYEA EHAGRVVEQV VRPTGLVDPQ
VEVRPALTQV DDLLSEIRKR VAAGERVLAT TLTKRMAEDL SDYLADHDVR VRYLHSDIDT
VERVEIIRDL RLGTFDVLVG INLLREGLDM PEVSLVAILD ADKEGFLRSE RSLIQTIGRA
ARNLNGRAIL YADNVTGSMQ RAIDETERRR EKQIAFNEAN GIVPKGVVKD ITDIMEGATV
PGARSKKRKG MAKAAEESAR YEAELRTPGE ITKRIKQLEE KMMQFARDLE FEAAAQLRDE
IAQLRERLIS S
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