Gene PP_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1963 
Symbol 
ID1043077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2224626 
End bp2226629 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content47% 
IMG OID637145368 
Producthypothetical protein 
Protein accessionNP_744115 
Protein GI26988690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000353876 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAATCCGC TTGGAGCTGC GTTCGCGTCG ATTAATGCAA TGAATTTCAC AAAAGAAGTA 
CTAGAAACAA ATTACGTTAT CGGAAATTGT GGAAGAAAAG TCACAGCCGA CTATTTAGAG
CACATCTGCT TTGATGCCAA CTCAAATTTG TGTCTAACTC TGCACTACCT TTTCCTTTGC
TATGCGCCGA CCACCGCAAT GACACACGGG CGGCAGCTTG CGACCGCTAT CAAGTATTTC
TTTGACTTTC TTTGCGAGTA TATCGCTAAC AATCCTTTCG ACCTACACCC CGACAAATAC
ACCGACATCT CGGTAGAGTT ATTTTACCAG TACCAAGATT ACATGCTGCG GAACAAAATC
TCTCTTCTTA ATGCTGAGAA ATTGAGAACC GCCATGGGTG TTGTAGCCCG ACAACACGGA
ACTGTTCCAC TACTGTTGCT ACAGGTTTAC CGGAGGCCAA AGCCTAAAAA GACAGAGCCG
CTGGGCGATG ATGCATATCA TATGCTCTGC CAGGCACTAA CTAGCCATAT TGATGGCCTC
TATGAAAAAC TTGAATATCG CAAAACTGTT GACCAAGCAG AGCCGTACAC TCTTGAAACG
ATGGAGCCCA ACATACCAGG TCTGAAGGTT AACATGAGAG GCTGGGAGGT AGATCACGCA
CGCAGCCTCA AGACCCTGCT TAACCATGAC TTTCCCATGG CTATGACGCT TGAGCAGATG
GAGCCCATGA TGACTAAAAA CATCCTATCA AGCTATAGGA AGAATAATCA TCATGTTGTT
CCCGCCTTGC TACACAAATA TGTTTATTGC GCGAACTACA ATAACAGCCT CAACCTTGAC
GGACTGCTTG GGCTCTACTA TCCAAGCGAC CTGGATCAAT GCGCTATCGC TATATTCTTG
CTTCTCCAAA CTGGGTGGAA CAAAGAATCC GTTCTAGAGG TCGATGGAGA CGATTTTGAG
CATGCACTTA GCGGCTCTAT TGATGAAAGC TTGTCAGTTG TTTTTTCCGA GAAATTTCGT
TCGCAAGGCA ATGAACAGCC GTTTGACGCG CCAAAACAGA TGACCGCCTC CAGCAATCGG
GATGATCCTT ATTCGATTCA CAATCTAGTT CTATTGGCTA AAGAACTCTC AAAGCCAATG
AAAGGTTATC AATTCGATGC AGACCCCTTT CTGGCAAATG GAAAAGAGCG CAATGAATTA
TTCATGTTCC TGCGCTGCTG GGGCGACTGG TTCAAAAATA AAAGCAGGCA CTCCTCCATC
TCCGTTCCGA ACTCGTACGT TCACGGCTGC GAAGCCTTTC TAAAACAGCA CGAGGTGCAT
GAGAGCGGTA GACGCCTGAA GCTTGCCAGT GATATCACTC GACGCCTGAG ACCTACTTGG
CTGAAACATA AGAAACGCGA ATATGGCCTG AACATTATCA GCTCCCATTT TGGCCACGCT
GACGCGCGCA CCACTGACAT CCATTACGAT AGTTCAGGCG CTGCAATGGC GGACCGTATG
ATAAGACTGC GGAATGAGGT CGAGGCGGTT ACAGCCCTAC TTATTAACCG TAAGTTCACG
GGCCTCTTGG GCAAGCGTGC CAATGATCAA GCAAAGCAGC AGGTGAAAAT CTTTGCCATT
CCTGGTCATC CCGGCCCGCT CTGGGGATGC GAAAATCAGT ATCAACCAGA CTGGAAGGGA
TTCGAGCAAT CGGTTCCTAA TGGAAAGAAA TGCTACAGCA TAGACAAGTG CATCGGCTGC
TCCCAGGTTC GAATTTACGA AGACTCACTA CCCTATTTGA TGGAGCGTCT AGCTCATATT
GAGTATGAGC TGGAAAATGA AAGCGAAGGT GCACGGTCCT CTGACCTGCG CTGGGAAGGT
AAAATTTTGG AGTTTCTCAT CAACGACAAT CATGATGAAG ACACCATCAA GCAGGCTTCG
CGATATAGAC GGCGGAACGC CCCGCTATTA CCACGCGACC TAGCTAGCCT TCGATTGATA
TTTGATGAGA ACGACGATGA CTGA
 
Protein sequence
MNPLGAAFAS INAMNFTKEV LETNYVIGNC GRKVTADYLE HICFDANSNL CLTLHYLFLC 
YAPTTAMTHG RQLATAIKYF FDFLCEYIAN NPFDLHPDKY TDISVELFYQ YQDYMLRNKI
SLLNAEKLRT AMGVVARQHG TVPLLLLQVY RRPKPKKTEP LGDDAYHMLC QALTSHIDGL
YEKLEYRKTV DQAEPYTLET MEPNIPGLKV NMRGWEVDHA RSLKTLLNHD FPMAMTLEQM
EPMMTKNILS SYRKNNHHVV PALLHKYVYC ANYNNSLNLD GLLGLYYPSD LDQCAIAIFL
LLQTGWNKES VLEVDGDDFE HALSGSIDES LSVVFSEKFR SQGNEQPFDA PKQMTASSNR
DDPYSIHNLV LLAKELSKPM KGYQFDADPF LANGKERNEL FMFLRCWGDW FKNKSRHSSI
SVPNSYVHGC EAFLKQHEVH ESGRRLKLAS DITRRLRPTW LKHKKREYGL NIISSHFGHA
DARTTDIHYD SSGAAMADRM IRLRNEVEAV TALLINRKFT GLLGKRANDQ AKQQVKIFAI
PGHPGPLWGC ENQYQPDWKG FEQSVPNGKK CYSIDKCIGC SQVRIYEDSL PYLMERLAHI
EYELENESEG ARSSDLRWEG KILEFLINDN HDEDTIKQAS RYRRRNAPLL PRDLASLRLI
FDENDDD