Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1963 |
Symbol | |
ID | 1043077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2224626 |
End bp | 2226629 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637145368 |
Product | hypothetical protein |
Protein accession | NP_744115 |
Protein GI | 26988690 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000353876 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAATCCGC TTGGAGCTGC GTTCGCGTCG ATTAATGCAA TGAATTTCAC AAAAGAAGTA CTAGAAACAA ATTACGTTAT CGGAAATTGT GGAAGAAAAG TCACAGCCGA CTATTTAGAG CACATCTGCT TTGATGCCAA CTCAAATTTG TGTCTAACTC TGCACTACCT TTTCCTTTGC TATGCGCCGA CCACCGCAAT GACACACGGG CGGCAGCTTG CGACCGCTAT CAAGTATTTC TTTGACTTTC TTTGCGAGTA TATCGCTAAC AATCCTTTCG ACCTACACCC CGACAAATAC ACCGACATCT CGGTAGAGTT ATTTTACCAG TACCAAGATT ACATGCTGCG GAACAAAATC TCTCTTCTTA ATGCTGAGAA ATTGAGAACC GCCATGGGTG TTGTAGCCCG ACAACACGGA ACTGTTCCAC TACTGTTGCT ACAGGTTTAC CGGAGGCCAA AGCCTAAAAA GACAGAGCCG CTGGGCGATG ATGCATATCA TATGCTCTGC CAGGCACTAA CTAGCCATAT TGATGGCCTC TATGAAAAAC TTGAATATCG CAAAACTGTT GACCAAGCAG AGCCGTACAC TCTTGAAACG ATGGAGCCCA ACATACCAGG TCTGAAGGTT AACATGAGAG GCTGGGAGGT AGATCACGCA CGCAGCCTCA AGACCCTGCT TAACCATGAC TTTCCCATGG CTATGACGCT TGAGCAGATG GAGCCCATGA TGACTAAAAA CATCCTATCA AGCTATAGGA AGAATAATCA TCATGTTGTT CCCGCCTTGC TACACAAATA TGTTTATTGC GCGAACTACA ATAACAGCCT CAACCTTGAC GGACTGCTTG GGCTCTACTA TCCAAGCGAC CTGGATCAAT GCGCTATCGC TATATTCTTG CTTCTCCAAA CTGGGTGGAA CAAAGAATCC GTTCTAGAGG TCGATGGAGA CGATTTTGAG CATGCACTTA GCGGCTCTAT TGATGAAAGC TTGTCAGTTG TTTTTTCCGA GAAATTTCGT TCGCAAGGCA ATGAACAGCC GTTTGACGCG CCAAAACAGA TGACCGCCTC CAGCAATCGG GATGATCCTT ATTCGATTCA CAATCTAGTT CTATTGGCTA AAGAACTCTC AAAGCCAATG AAAGGTTATC AATTCGATGC AGACCCCTTT CTGGCAAATG GAAAAGAGCG CAATGAATTA TTCATGTTCC TGCGCTGCTG GGGCGACTGG TTCAAAAATA AAAGCAGGCA CTCCTCCATC TCCGTTCCGA ACTCGTACGT TCACGGCTGC GAAGCCTTTC TAAAACAGCA CGAGGTGCAT GAGAGCGGTA GACGCCTGAA GCTTGCCAGT GATATCACTC GACGCCTGAG ACCTACTTGG CTGAAACATA AGAAACGCGA ATATGGCCTG AACATTATCA GCTCCCATTT TGGCCACGCT GACGCGCGCA CCACTGACAT CCATTACGAT AGTTCAGGCG CTGCAATGGC GGACCGTATG ATAAGACTGC GGAATGAGGT CGAGGCGGTT ACAGCCCTAC TTATTAACCG TAAGTTCACG GGCCTCTTGG GCAAGCGTGC CAATGATCAA GCAAAGCAGC AGGTGAAAAT CTTTGCCATT CCTGGTCATC CCGGCCCGCT CTGGGGATGC GAAAATCAGT ATCAACCAGA CTGGAAGGGA TTCGAGCAAT CGGTTCCTAA TGGAAAGAAA TGCTACAGCA TAGACAAGTG CATCGGCTGC TCCCAGGTTC GAATTTACGA AGACTCACTA CCCTATTTGA TGGAGCGTCT AGCTCATATT GAGTATGAGC TGGAAAATGA AAGCGAAGGT GCACGGTCCT CTGACCTGCG CTGGGAAGGT AAAATTTTGG AGTTTCTCAT CAACGACAAT CATGATGAAG ACACCATCAA GCAGGCTTCG CGATATAGAC GGCGGAACGC CCCGCTATTA CCACGCGACC TAGCTAGCCT TCGATTGATA TTTGATGAGA ACGACGATGA CTGA
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Protein sequence | MNPLGAAFAS INAMNFTKEV LETNYVIGNC GRKVTADYLE HICFDANSNL CLTLHYLFLC YAPTTAMTHG RQLATAIKYF FDFLCEYIAN NPFDLHPDKY TDISVELFYQ YQDYMLRNKI SLLNAEKLRT AMGVVARQHG TVPLLLLQVY RRPKPKKTEP LGDDAYHMLC QALTSHIDGL YEKLEYRKTV DQAEPYTLET MEPNIPGLKV NMRGWEVDHA RSLKTLLNHD FPMAMTLEQM EPMMTKNILS SYRKNNHHVV PALLHKYVYC ANYNNSLNLD GLLGLYYPSD LDQCAIAIFL LLQTGWNKES VLEVDGDDFE HALSGSIDES LSVVFSEKFR SQGNEQPFDA PKQMTASSNR DDPYSIHNLV LLAKELSKPM KGYQFDADPF LANGKERNEL FMFLRCWGDW FKNKSRHSSI SVPNSYVHGC EAFLKQHEVH ESGRRLKLAS DITRRLRPTW LKHKKREYGL NIISSHFGHA DARTTDIHYD SSGAAMADRM IRLRNEVEAV TALLINRKFT GLLGKRANDQ AKQQVKIFAI PGHPGPLWGC ENQYQPDWKG FEQSVPNGKK CYSIDKCIGC SQVRIYEDSL PYLMERLAHI EYELENESEG ARSSDLRWEG KILEFLINDN HDEDTIKQAS RYRRRNAPLL PRDLASLRLI FDENDDD
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