| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1962 |
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| Symbol | |
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| ID | 1043081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2222615 |
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| End bp | 2224543 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637145367 |
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| Product | phage integrase family site specific recombinase |
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| Protein accession | NP_744114 |
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| Protein GI | 26988689 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000374969 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGGAGA CCGCCGGAGA ACTTGAGTCC TCGAAGAGCG GCCTACTTAT CAAGCTTCTT
ACGCTCCCAG GCGGAGATTT CCCCGTCTCA TTAGAGTCGG AATTCAGAGA CAGCATTTGG
AAACTTGCGG ACACAACACA AAGCGCATGT AACATTCGCT TTGATCGAGA GATACCAGGT
GGGAACGACC TGAAAAGGGC AATTGTTTAC CATTTGCTCC CTGCATTTAC TCCCTTCAAT
CGTATTCGTT CCTTCGTATC ATCCAAAGCG AAATCTCACG ACTATCGGTT TATCGAAATT
TACCTATTGG GCCCCAATAG GCTTTCAGCG ATTCCTGAGC ACTTGGATCT CATAACAAAT
CCGATGCTTA ATCGGGCCCT CGACGACGCA AAAGCAAGTG GACAACCGAG TCATTATTCA
GGCCTGTTTT TCATGTTGCG ATTTTGGCTT TCCTTATCGC TCAACAAGCT AATTCCTGAA
AGTTTAAGGC TACCCGAACA TATCACATCA TTCGATAGCC ATGAGCGCCA CAAGGACGTC
CTAGATAATT TCAAGGGCTC GATTCAATCG TGGGTTCCTC TTTCCGAAGA AGATCTTGAA
AAAGTCGTCA CAGAAGCATT ATTTTGGCTA GAAAAAGCCA TACCAAGGCT TTTGGACCTA
CGACAATACA TCATCGAGAA CAAGATCGAC CAATATGAAA AGGGAAAAGT CTACAGCCCG
ACTCGCCAAC CTGATTACGA AAAAATCCTG CATATTGAGA TCGACGGAAG GAAAGTCTCT
AGCTTTTCCA TAACCACATC GAGAAACCGA AACTCTATTA GGTATGCCTA TTCTTGGGTA
ATCGAATACG CGCAAGCTAT CGACAAAGTT CGAAATGCTG TTTTTGTTTT TGTTGCCCTC
GTCACCGGCA TGCGCAAATC GGAACTAGGC GGCTTAAAAT TCGACGACAT AACTCAAGAC
GAAGCAGGTT TGTACTGGAT TGACATTACC CGATACAAGA CCTCGAACGA CCCAAATTAT
AATGGTGAGA CTGAACGCCT CCCTCTACCT AAATTTGTTG GTGAAACCAT TAAATCTCTG
AGAACGCTCC GCTCTACGTG GACCTTCTAC AGGGAGGGCT TCATTTTTCA GAGTGCTTCA
TCATCGATCA AGGTAACCAA AGGTGTTCCG CAGCTGCCGA ACACAATCAT TGATTATCTC
GAAGAAGTGA CGGGGATCGA GCGCCTCCAT CCGCATCGCT TTCGGAAAAC GATTGCAGAA
ATCCTGATCA ATCGGAGCGA ACGAAATATT GACCTGATCC GTCTGCTGTT CGGCCACCAT
TCCTATGAGA TGACACTGCG CTACATCAGT CGCAACCCCT ACATGGTGCG CTCCGTAGCT
ATGGCCCTTG AAGAAAGCTT CTCCAAGGAG TTTCACGAAA TCGTCACCGC AGTGCGCGAC
GGGACCCACT CAGGTCCTGG CGCTGATCGG CTCGCGAAGC AGATCGTTAC CCGTCCGGAT
GACTTCAAAG GCAAACGCCT GAAGCTATCG ATACTGGTAT ACGTCAGCCA CCTCCTGAGC
GCTGGCTCTC CGCTCTATGT AGGCCGGACC GCCATGGGGA CATATTGCAT GTCTGGAGAG
GAGTTCGACG AGACGAATCT GCCTCCTTGC TTGGCTGGAC GCCCTCGCCC GAAGGGACGC
CTGCTTCCAG ATCCAACGAA TTGCCAAGTG GAATGCCATA ACGCGGTTGT ATTGGGTAAA
GCTGAAACAG CCATGAAGGA CAACATCCAC TTCTACGAAC AGCTGCTTGA AAACGCGGAC
GACAGCGTAT CCGCCAAGGC GCGCCGGAAA ATACAGGCAA AAATCGATGC ACACAAACGC
CACTTACTCA ATTTGCACGA TAACGCGCAC ACCAAAGCCC TGCGCATTCC GGTGCTGGAG
GTATCCTGA
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| Protein sequence | MQETAGELES SKSGLLIKLL TLPGGDFPVS LESEFRDSIW KLADTTQSAC NIRFDREIPG
GNDLKRAIVY HLLPAFTPFN RIRSFVSSKA KSHDYRFIEI YLLGPNRLSA IPEHLDLITN
PMLNRALDDA KASGQPSHYS GLFFMLRFWL SLSLNKLIPE SLRLPEHITS FDSHERHKDV
LDNFKGSIQS WVPLSEEDLE KVVTEALFWL EKAIPRLLDL RQYIIENKID QYEKGKVYSP
TRQPDYEKIL HIEIDGRKVS SFSITTSRNR NSIRYAYSWV IEYAQAIDKV RNAVFVFVAL
VTGMRKSELG GLKFDDITQD EAGLYWIDIT RYKTSNDPNY NGETERLPLP KFVGETIKSL
RTLRSTWTFY REGFIFQSAS SSIKVTKGVP QLPNTIIDYL EEVTGIERLH PHRFRKTIAE
ILINRSERNI DLIRLLFGHH SYEMTLRYIS RNPYMVRSVA MALEESFSKE FHEIVTAVRD
GTHSGPGADR LAKQIVTRPD DFKGKRLKLS ILVYVSHLLS AGSPLYVGRT AMGTYCMSGE
EFDETNLPPC LAGRPRPKGR LLPDPTNCQV ECHNAVVLGK AETAMKDNIH FYEQLLENAD
DSVSAKARRK IQAKIDAHKR HLLNLHDNAH TKALRIPVLE VS
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