Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1956 |
Symbol | |
ID | 1043092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2213172 |
End bp | 2214140 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637145361 |
Product | hypothetical protein |
Protein accession | NP_744108 |
Protein GI | 26988683 |
COG category | [C] Energy production and conversion |
COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.235366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00028826 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAATA AGTACGCACG CTATCTCGCG GTAATTGCCC TGCATGTGGT TTTTGGAAAT ACCACATTTG CTGCCGAAAA TATCAAGCCA GCCGGCCCAA TTGGCGGCAC TGATATTCGA CAAGCGATTC TACCTCCACC AGGTGTTTAT GGCCTGGGCG TTGGTGTAGG GCTTGGATTT CCTACCTACT GGACAGAGGA CGATGACTTA GATGCGAAGG GCGGCTCTGG TATTCTTGGG TTCGGGGCGG CGATTGTCTA TGACACAGAG GTATTTGGTG GGTCAATTGC CTCTACAGCC TTTGCCAGCT ATGAGCGGAC GTGCTTTGGG TTTAAGGGGG GAGACAAATT TTGTTCTGAA GGACAAGGTG ACATTTATTC AGACGTTTTG ATGTGGTCCA GGAATTTTCC TATGGGCTAC GAGCGCTCTA AGACCGCGCC GTGGATTCCA TATGGCTTAA ATGTGTTGCT GGGGCTTGGT GTGACTTTCC CAACAGGAAA GTATGACAAA TCAGAAATGG TTAACGTCAG CGCAAATGTC TACGACTTTG CTCCTAACTT CGCACTGACT TATGTGGTGC CAAGCATATT TGGTGAGGGA ACTGGGGATG CAACTGAGTT CAGCGCGCGC GTGTTCTACA ACATGTACAC CAAAAACCAT GACACGGACT ATCAAACGGG CGACCTGGTC AGCATGGATT TTGCAATTTC TCAGCGATTT GGCCAGTGGC AAGTAGGCCT GGCGGGAACA GGCTTCGTGC AAATCGAAGA CGACCGGGTC AATGGTTTTA CCCCTCCTAA TAATGGAAAT CGGGCCAAGT CTCTATCGCT TGGACCAGTG GTGTCTTATG ACTTCCTATG GGATGACACG CCTTGGAACG TCACCCTCAA GGGCTTGACC GGCATCGACG GGGAAAATAC TGCCGCAGCG CGCGGCGTCG TCTTGAAGAT CGGGCGTCAG TTTATGTAG
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Protein sequence | MNNKYARYLA VIALHVVFGN TTFAAENIKP AGPIGGTDIR QAILPPPGVY GLGVGVGLGF PTYWTEDDDL DAKGGSGILG FGAAIVYDTE VFGGSIASTA FASYERTCFG FKGGDKFCSE GQGDIYSDVL MWSRNFPMGY ERSKTAPWIP YGLNVLLGLG VTFPTGKYDK SEMVNVSANV YDFAPNFALT YVVPSIFGEG TGDATEFSAR VFYNMYTKNH DTDYQTGDLV SMDFAISQRF GQWQVGLAGT GFVQIEDDRV NGFTPPNNGN RAKSLSLGPV VSYDFLWDDT PWNVTLKGLT GIDGENTAAA RGVVLKIGRQ FM
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