Gene PP_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1956 
Symbol 
ID1043092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2213172 
End bp2214140 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content51% 
IMG OID637145361 
Producthypothetical protein 
Protein accessionNP_744108 
Protein GI26988683 
COG category[C] Energy production and conversion 
COG ID[COG4313] Protein involved in meta-pathway of phenol degradation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.235366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00028826 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAATA AGTACGCACG CTATCTCGCG GTAATTGCCC TGCATGTGGT TTTTGGAAAT 
ACCACATTTG CTGCCGAAAA TATCAAGCCA GCCGGCCCAA TTGGCGGCAC TGATATTCGA
CAAGCGATTC TACCTCCACC AGGTGTTTAT GGCCTGGGCG TTGGTGTAGG GCTTGGATTT
CCTACCTACT GGACAGAGGA CGATGACTTA GATGCGAAGG GCGGCTCTGG TATTCTTGGG
TTCGGGGCGG CGATTGTCTA TGACACAGAG GTATTTGGTG GGTCAATTGC CTCTACAGCC
TTTGCCAGCT ATGAGCGGAC GTGCTTTGGG TTTAAGGGGG GAGACAAATT TTGTTCTGAA
GGACAAGGTG ACATTTATTC AGACGTTTTG ATGTGGTCCA GGAATTTTCC TATGGGCTAC
GAGCGCTCTA AGACCGCGCC GTGGATTCCA TATGGCTTAA ATGTGTTGCT GGGGCTTGGT
GTGACTTTCC CAACAGGAAA GTATGACAAA TCAGAAATGG TTAACGTCAG CGCAAATGTC
TACGACTTTG CTCCTAACTT CGCACTGACT TATGTGGTGC CAAGCATATT TGGTGAGGGA
ACTGGGGATG CAACTGAGTT CAGCGCGCGC GTGTTCTACA ACATGTACAC CAAAAACCAT
GACACGGACT ATCAAACGGG CGACCTGGTC AGCATGGATT TTGCAATTTC TCAGCGATTT
GGCCAGTGGC AAGTAGGCCT GGCGGGAACA GGCTTCGTGC AAATCGAAGA CGACCGGGTC
AATGGTTTTA CCCCTCCTAA TAATGGAAAT CGGGCCAAGT CTCTATCGCT TGGACCAGTG
GTGTCTTATG ACTTCCTATG GGATGACACG CCTTGGAACG TCACCCTCAA GGGCTTGACC
GGCATCGACG GGGAAAATAC TGCCGCAGCG CGCGGCGTCG TCTTGAAGAT CGGGCGTCAG
TTTATGTAG
 
Protein sequence
MNNKYARYLA VIALHVVFGN TTFAAENIKP AGPIGGTDIR QAILPPPGVY GLGVGVGLGF 
PTYWTEDDDL DAKGGSGILG FGAAIVYDTE VFGGSIASTA FASYERTCFG FKGGDKFCSE
GQGDIYSDVL MWSRNFPMGY ERSKTAPWIP YGLNVLLGLG VTFPTGKYDK SEMVNVSANV
YDFAPNFALT YVVPSIFGEG TGDATEFSAR VFYNMYTKNH DTDYQTGDLV SMDFAISQRF
GQWQVGLAGT GFVQIEDDRV NGFTPPNNGN RAKSLSLGPV VSYDFLWDDT PWNVTLKGLT
GIDGENTAAA RGVVLKIGRQ FM