| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1947 |
|---|
| Symbol | |
|---|
| ID | 1043113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 2202321 |
|---|
| End bp | 2203310 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637145352 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_744099 |
|---|
| Protein GI | 26988674 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2309] Leucyl aminopeptidase (aminopeptidase T) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000506957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | TTGAACAATC AAGATTTGGT TAAGGTGCTT GAAACGCCTT TGAAGTTAAA TGCGAAATCA
GGCGAGCAGA TTTATATTAT TACCGATACT GCGATGGAGC CCGAAGTCTG GCAGGCCCTC
TCCCAAGCAG CGGTGAATCT TTCCATGGAA CCCACGGTTG CGATCATGCA ACCGCGCGCC
TTCCATGCTC AGGACCCTAT TCCATCCATC GTTTCGGGCG CCCTGGACCC GAGCAACGAC
CTTGTCGTTT ACCTGACGAG TACAGCACTG GCACATGCCC CCATTACCGA TCTGATGATT
GAGCATGAGC GCCGTTTCTT GCTCATGGAG GAAGTCACCA CGGCCATGTT GGATAAGGAT
GGTCCAGCGG GTGCTGATTA CCATGCGCTG AATATCCTCG GCAGGAAGAT TGCTGATCTT
TTCACAAACG GCAAGCAGGT CACCGTTACT TGTCCAAACG GTACTCATTT GACCGCCAGT
ATTGAAGGTC GTGTTGGGCG TGCCATCACT GGGCTACCTG TCGTTATGCG GCCAGGTGGC
GGTAGTGGCT GCGCATTTCC GGATGGCGAA ACACACGTGT GCCCGGTCGA AGGAACCGGC
GAGGGCACGA TTGTTTTTGA CATGACCGCT CACTCGGTGG GTGCCCTAGC GGAGCCTATT
ACGGTAACCG TTAAGAATGG CATGGCCGTG TCTATTGAAG GTGGCAAGCA AGCAGCTATG
TGGCGCGAGA TTTTCGCTAA GCACGGCGAC CCTGAAAGCT TTAATTGTCC GGCTGAAATC
GCGATTGGGC TCAATCCGCA AGTTAAACAA ACGGGCTCCA TGCGTACCGA TAAAAAAATG
TACGCAACTT CACACATTGG CCTCGGTGAT ACAACAGCCC TGGGTGGTAC TTGTAAGGCG
AAGCTTCGAC TTGAAGGTGT AATTCGGGAG CCCTGCATCA GCGTCGATGG TGTTGTGGTA
ACCCGTGGTG GAAAAATTTT AATCGATTAA
|
|---|
| Protein sequence | MNNQDLVKVL ETPLKLNAKS GEQIYIITDT AMEPEVWQAL SQAAVNLSME PTVAIMQPRA
FHAQDPIPSI VSGALDPSND LVVYLTSTAL AHAPITDLMI EHERRFLLME EVTTAMLDKD
GPAGADYHAL NILGRKIADL FTNGKQVTVT CPNGTHLTAS IEGRVGRAIT GLPVVMRPGG
GSGCAFPDGE THVCPVEGTG EGTIVFDMTA HSVGALAEPI TVTVKNGMAV SIEGGKQAAM
WREIFAKHGD PESFNCPAEI AIGLNPQVKQ TGSMRTDKKM YATSHIGLGD TTALGGTCKA
KLRLEGVIRE PCISVDGVVV TRGGKILID
|
|---|
| |