Gene PP_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1943 
SymbolpurU 
ID1043117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2198238 
End bp2199098 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content50% 
IMG OID637145348 
Productformyltetrahydrofolate deformylase 
Protein accessionNP_744095 
Protein GI26988670 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0788] Formyltetrahydrofolate hydrolase 
TIGRFAM ID[TIGR00655] formyltetrahydrofolate deformylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000066655 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGAATAAAA ACAACCAATA CGTGCTTTCG CTTGCCTGCC AAGACGCTCC TGGTATCGTT 
TCGGAGGTTT CCACTTTCTT GTTCAATAAC GGCGCGAACA TTGTTGAGGC TGAACAATTC
AACGATGAAG ACAGCTCGAA ATTCTTCATG CGCGTCTCTG TTGAAATTCC TGTGGCGGGA
GTGAATGACT TCAACAGTGC ATTTGGAAAG GTTGTTGAAA AATACAACGC CGAATGGTGG
TTCCGACCAC GCACTGACCG CAAAAAAGTT GTAATCATGG TTTCCAAGTT TGATCACTGT
CTAGGCGATC TGCTTTATCG CCACCGCCTA GGTGAGTTGG ATATGGAAGT TGTCGGTATC
ATCTCAAATC ACCCTAGAGA GGCGCTCAGC GTCAGTTTGG TGGGGGATAT TCCGTTCCAC
TATCTGCCTG TTACACCTGC GACCAAGGCT GCCCAAGAGT CGCAAATTAA GAATATCGTT
ACTCAAAGCC AAGCGGACTT GATCGTTCTC GCACGCTACA TGCAGATTCT TTCTGATGAT
CTTTCGGCCT TTCTCTCAGG ACGCTGCATC AACATCCATC ACAGCTTCTT GCCTGGATTC
AAAGGGGCCA AGCCGTACCA CCAGGCTCAC ACCCGTGGGG TCAAGCTGAT TGGTGCCACT
GCGCACTTTG TTACCGCTGA TCTCGATGAA GGCCCAATTA TTGCGCAAGA CGTCGAACAC
GTAAGTCATC GTGACTCAGC AGAGGATCTG GTTCGTAAAG GCCGCGACAT TGAGCGTCGT
GTGCTGTCGA GGGCCGTGCT CTTGTTCCTA GAGGACCGCT TGATTGTGAA TGGTGAACGA
ACCGTAGTTT TTGCTGACTG A
 
Protein sequence
MNKNNQYVLS LACQDAPGIV SEVSTFLFNN GANIVEAEQF NDEDSSKFFM RVSVEIPVAG 
VNDFNSAFGK VVEKYNAEWW FRPRTDRKKV VIMVSKFDHC LGDLLYRHRL GELDMEVVGI
ISNHPREALS VSLVGDIPFH YLPVTPATKA AQESQIKNIV TQSQADLIVL ARYMQILSDD
LSAFLSGRCI NIHHSFLPGF KGAKPYHQAH TRGVKLIGAT AHFVTADLDE GPIIAQDVEH
VSHRDSAEDL VRKGRDIERR VLSRAVLLFL EDRLIVNGER TVVFAD